Gene
RNA
| Item | Value |
|---|---|
| gene id | G1042955 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 16488923 ~ 16490600 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: serine/arginine repetitive matrix protein 5-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1188536 | True | 508 | lncRNA | 0.43 | 2 | 16488923 | 16490600 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537059 | LOC106568318 | coding | downstream | 160755 | 16324956 ~ 16328168 (-) |
| ppwd1 | ppwd1 | coding | downstream | 164161 | 16320428 ~ 16324762 (-) |
| mzt2b | LOC106568316 | coding | downstream | 176577 | 16307357 ~ 16312346 (-) |
| LOC110537052 | LOC106568339 | coding | downstream | 568668 | 15879419 ~ 15920255 (-) |
| LOC110536799 | LOC106568341 | coding | downstream | 631899 | 15806675 ~ 15857024 (-) |
| LOC110537062 | csn4 | coding | upstream | 78886 | 16569486 ~ 16576847 (-) |
| LOC110537069 | LOC106568328 | coding | upstream | 125767 | 16616367 ~ 16630120 (-) |
| LOC100305243 | LOC106562364 | coding | upstream | 146890 | 16634735 ~ 16638951 (-) |
| LOC110537074 | LOC106562412 | coding | upstream | 449827 | 16940427 ~ 17041905 (-) |
| LOC110537073 | LOC106568283 | coding | upstream | 551771 | 17042371 ~ 17064591 (-) |
| G1042754 | NA | non-coding | downstream | 72457 | 16416205 ~ 16416466 (-) |
| G1042753 | NA | non-coding | downstream | 74428 | 16413450 ~ 16414495 (-) |
| G1042745 | NA | non-coding | downstream | 85231 | 16403461 ~ 16403692 (-) |
| G1042722 | NA | non-coding | downstream | 109560 | 16379161 ~ 16379363 (-) |
| G1042704 | NA | non-coding | downstream | 125326 | 16363329 ~ 16363597 (-) |
| G1043015 | NA | non-coding | upstream | 107114 | 16597714 ~ 16598284 (-) |
| G1043017 | NA | non-coding | upstream | 107858 | 16598458 ~ 16598766 (-) |
| G1043022 | LOC100380853 | non-coding | upstream | 113612 | 16604212 ~ 16604439 (-) |
| G1043026 | NA | non-coding | upstream | 117912 | 16608512 ~ 16608845 (-) |
| G1043027 | NA | non-coding | upstream | 119503 | 16610103 ~ 16611141 (-) |
| G1042500 | NA | other | downstream | 384040 | 16104163 ~ 16104883 (-) |
| G1040432 | LOC106568413 | other | downstream | 2177871 | 14307600 ~ 14311052 (-) |
| G1040300 | NA | other | downstream | 2308782 | 14178658 ~ 14180141 (-) |
| G1039504 | NA | other | downstream | 3133128 | 13355300 ~ 13355795 (-) |
| LOC110537061 | LOC106568319 | other | upstream | 43017 | 16417638 ~ 16549073 (-) |
| LOC110537077 | LOC106568284 | other | upstream | 574721 | 17065241 ~ 17068020 (-) |
| G1044482 | NA | other | upstream | 1205529 | 17696129 ~ 17697105 (-) |
| G1044649 | LOC106568140 | other | upstream | 1527504 | 18018104 ~ 18018758 (-) |
| G1044671 | NA | other | upstream | 1565511 | 18056111 ~ 18058392 (-) |
