G1043066


Basic Information

Item Value
gene id G1043066
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 16718702 ~ 16720707 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1188659
TTGTCCATTCCAGTAGAATAAAGATGACTCTACAGATCCGTTCTCTCAGGAGGAAATCCTGGCGTTGGACCTCCAGGAAGGAGGCTTTCTTCCAACCCCCTCTGACCCAGCATCAAGCTTCCTTCACTGGGATCACTACAGCTGCCATTTCCCCTGGTGCTCTGGGGAACCTGCTTGGGGCTGGGAAAGGGGCCTGGGAGCTGCTTCATGCCCAGGTATGGAGCCCCAGACCAGGCAGGGATAGCTCCTGTGTAATTATCCATCTGAGCCCCTCTGGATAGGGCGGGGATGGGGGTGGGGATGGAGGCTGGGGGGTAGGTTAGGTTAGGAATGGAGTCTTGCGGATAAGATTTGGTAGATCTTGAGATTATGGATGCTTGAGGGTAAGTCATAAAGACTTTGGGGGCCTGGGTTGAGGAGCTGGTTTTACAGTCATTGGAAAGAGTGGGAGTGGGTCTGGGTTCATTGTAGTAAGTGGGGGCAGGTATGAGACCGTGTGATCTGCTTGGGGCAGTTGTAAGGGGGCTGGAGGGATTGGAGACATTTGGAGTTGTCTTGTCAAACATACAGCTgcctgagggtgtgtgtgtggtgtgtgtgagtgtttgagtTCTGGGTGCGTTATTGGACGGtatgtgtgtgctgtgtttgggGTGTGTGTGACGATGTCTGTTTACTGGCTTTGCAGGAAAACCCTGTGGTATCCGCCGTGGTTGCCATTGTGTGTGTTGACGTGGCTGTTGCCAAGACTGCCTTGGGTCCTGATATGACAGACCTGGATAGGGCTGCCCTGAGAACTGCCTGTTTGCATCTCCAGTCTCAGAGTGGTATAACTCCCGGCTGGGCTGCATGGTTTGGTCAAAGGCCTCTGGGAGATAGTTGTTAAATtttgggagagggacagagagagaggtgtggttATTATCATTTATATTTTGGATGGAGGGTATCCAGGACTCTGGTTGGTTGATAGTATGAGAAGGTTGTGGGACCATTTGGTTGCCATGGAGATCCGCACAGCTTCCTTGAATCCATTGCCTTGCAACGGTCTGAGCAGCTCTgggtagtgtgtttgtgtttacagTCCTCCGTGGCTGTCTCACAGTCCCAGGACTACACCCCAGTCCTTGCTCCACACCACCAACAACTCCATTTCCTAGCAACCTCTGCTCTCCAAAGCTGTTGAGGTTAAAGGTCATGTGTGGACCAGACAACTGCCATTGGTTCTCACTGTGGGAGCCGTTCCCGCCATTGAACCCCTGGTTGCCTGGCAATATGGAACTCTGGGAGTGAGGGAACCCACGTAGTATGTTTTGATTGGCAGTGATGTGAGCAGAAAGTCTGTTGATTGGCTCAGTGCCCTGTCCCAAGCTGCCCATCACACATCCATCATCACACTCTCTCATCAGAGCCTCCTCCACATAGGAGAACACATCATTGGCTAAGATATCATACAGCTCCCCCGTCACATCCTGCTGTTCCATGTTGATCCTGAGGAGAGTGTGGGGGAAAAGACCTGGAGgtccaggttagggttagcgTCCTGGGGCTGAGTATAAACAGAGCGGTCCTGACTAAGCAGGGACCCCAGGAGAGACGCAGGGTCCAGGGGCTTGTCCTCAGGGCAGGAGCCTGGGGGAGTGAGGCCAGGGGGGATGGGTGGTCCTGTAGGCATAATGGCAGTATTCAGAGAGGGACAGGACTCATACAGCAGAGCCTCCCCAGTGGCAAAGTTGAAGGGAAGCTGCATTCTCCGCTGACGCAGGTGCTCCTC

Function

NR:

description
aryl hydrocarbon receptor-like isoform X1

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1188659 True 1774 lncRNA 0.53 2 16718702 16720707

Neighbor

gene id symbol gene type direction distance location
LOC100305243 LOC106562364 coding downstream 79751 16634735 ~ 16638951 (-)
LOC110537069 LOC106568328 coding downstream 88582 16616367 ~ 16630120 (-)
LOC110537062 csn4 coding downstream 141855 16569486 ~ 16576847 (-)
LOC110537061 LOC106568319 coding downstream 169629 16417638 ~ 16549073 (-)
LOC110537059 LOC106568318 coding downstream 390534 16324956 ~ 16328168 (-)
LOC110537074 LOC106562412 coding upstream 219720 16940427 ~ 17041905 (-)
LOC110537073 LOC106568283 coding upstream 321664 17042371 ~ 17064591 (-)
LOC110537077 LOC106568284 coding upstream 344534 17065241 ~ 17068020 (-)
LOC110537076 LOC106568285 coding upstream 347474 17068181 ~ 17098190 (-)
LOC110537079 rilpl1 coding upstream 391056 17111763 ~ 17129179 (-)
G1043030 NA non-coding downstream 77852 16640607 ~ 16640850 (-)
G1043027 NA non-coding downstream 107561 16610103 ~ 16611141 (-)
G1043026 NA non-coding downstream 109857 16608512 ~ 16608845 (-)
G1043022 LOC100380853 non-coding downstream 114263 16604212 ~ 16604439 (-)
G1043065 NA non-coding upstream 161 16720868 ~ 16724754 (-)
G1043068 NA non-coding upstream 4787 16725494 ~ 16725767 (-)
G1043067 NA non-coding upstream 5424 16726131 ~ 16731656 (-)
G1043091 NA non-coding upstream 49894 16770601 ~ 16770803 (-)
G1043099 NA non-coding upstream 56596 16777303 ~ 16777578 (-)
G1042500 NA other downstream 613819 16104163 ~ 16104883 (-)
G1040432 LOC106568413 other downstream 2407650 14307600 ~ 14311052 (-)
G1040300 NA other downstream 2538561 14178658 ~ 14180141 (-)
G1044482 NA other upstream 975422 17696129 ~ 17697105 (-)
G1044649 LOC106568140 other upstream 1297397 18018104 ~ 18018758 (-)
G1044671 NA other upstream 1335404 18056111 ~ 18058392 (-)
G1044692 NA other upstream 1376856 18097563 ~ 18099722 (-)

Expression


Co-expression Network