G1043488


Basic Information

Item Value
gene id G1043488
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 16923503 ~ 16925143 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1189159
GGTTCTTTATTCTTTACGCCAGGCAGCGTTACATCTGATGCACACATATATTATCATAAGGTACTGTAGTCAAGTCCCAGTTCCACCGCAGCAGCTAGAACCAAACTCAGTCCTCACTATACATCTATCTTCCCTCATAGTACCAGGGGATCTCTTCAGTTAATAGCATATTGATTGCCTTGTAAACAGAATGGACAGGATACAACTGAGACTGGGCTTGTTAAGAGGCAGGTTGGTACATAGAAATATTTATCCTGGCAAGAAACACATATCGCAGTCTTCTACAAGCTAGTCATTAGAAGCATTTGTAAGACAGTGTTTCCGAAAGATTTATTCTTTGGCGAGGCGCAACGCCCCCCAAAAGCAACATCAGAAGGTTGAAGACACTGAACATTTCAAATCAGCCTTTTTAGATGTGGGGGGCAACAGTGCTGATCAGGCAGGCCACCTTGCCTAAGAAATGGTAGGAGGAAACACTGGAGGAGAACACGGTCCTAAAGAGTAATGGATTTATGTACAGTAGACACAGGAGGGTACAGTTAGTTCAATGGAGGTTTATAATACAATCAGAGCTGGTTTGTGCATGCATGCATCTGGTTGGCTCCCAGACCAACACCTGATCACTTCCTTAACCCATATAGGCTATATGATCAGAAGAGGTGGTCAGAAAGGTATTTCTTACTAAATCAGTGTTCTTTGCTCTTGGTCCTGGAGAGATGAATGCAGTGTGTGCAGGCTTACCCTAACACATCTTATTCAGCTGCTCACAGTCTTGGGGTTTAGTTGAtttgttgaatcaggtgtgttagtgctggactGGAAAGAAAGCCTGCACATACTACAACTCTCCAGGAGCAAGATCTAATGAAGTACTTCATAGTTACTAAATAAGTGGTTttaattcttaaaaaaaaaacaaaaaaacgatCATATCTCACATTTTAATCTTATAAAAAGGTGCTTAAAAGAAATCCTTCAGTCTTTTCTTTGTTTAAATGAGAAGCGGTCGATAGTCGTTACACCACACAGATACATTACCCATGTACATACAGTCTACAGGGGGATGGAAAGGAGAGGGAATCTGCCCTCGCTTttacagatggatggatggatgatattAACAAGCAGCAATGGGAGGAGCCTGTACATAGAAAATGGTGCAACACCTCATAATCCTTAAATCATAACTTACATTATAGCACTTTGTTCAGGTCTAAACAAGGGTATAAATCTGTTGCTTGTCAACAGTGGTTTCCAGATGTTTTGTGCTGTAAAGCCTTTCACTATACCCCTCTGGACAAATCAAACAATGCTTTATGCCACCACCCACATTTACAAATATACGACCATCGATTAGGGACAATTCACTTATGACATCAGTTATGTCATGCTTATGACAGTCTTAAGTATCCTTTACGCCAGAGGGTTCCAGTTAAGTGTTAggattagtgtgtgtttgtgtgtacgcgtgtgtgtgtacgtgtgtaggtgtgtgtgacaTGTCTAAAGAGCGCGAGGCCTCTTGGGGTTGATCTGTTTGCTCGCCTGCTCCTCTTCCTGGAGTGTAGAACGGAAACCCTTCACT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1189159 True 1585 lncRNA 0.42 2 16923503 16925143

Neighbor

gene id symbol gene type direction distance location
LOC100305243 LOC106562364 coding downstream 284552 16634735 ~ 16638951 (-)
LOC110537069 LOC106568328 coding downstream 293383 16616367 ~ 16630120 (-)
LOC110537062 csn4 coding downstream 346656 16569486 ~ 16576847 (-)
LOC110537061 LOC106568319 coding downstream 374430 16417638 ~ 16549073 (-)
LOC110537059 LOC106568318 coding downstream 595335 16324956 ~ 16328168 (-)
LOC110537074 LOC106562412 coding upstream 15284 16940427 ~ 17041905 (-)
LOC110537073 LOC106568283 coding upstream 117228 17042371 ~ 17064591 (-)
LOC110537077 LOC106568284 coding upstream 140098 17065241 ~ 17068020 (-)
LOC110537076 LOC106568285 coding upstream 143038 17068181 ~ 17098190 (-)
LOC110537079 rilpl1 coding upstream 186620 17111763 ~ 17129179 (-)
G1043482 LOC106562392 non-coding downstream 7832 16915326 ~ 16915671 (-)
G1043218 NA non-coding downstream 40096 16882734 ~ 16883407 (-)
G1043166 LOC106568302 non-coding downstream 60911 16858842 ~ 16862592 (-)
G1043143 NA non-coding downstream 118296 16792214 ~ 16805207 (-)
G1043099 NA non-coding downstream 145925 16777303 ~ 16777578 (-)
G1043515 NA non-coding upstream 75904 17001047 ~ 17002690 (-)
G1043548 NA non-coding upstream 128437 17053580 ~ 17054356 (-)
G1043550 NA non-coding upstream 134057 17059200 ~ 17085772 (-)
G1043545 NA non-coding upstream 152646 17077789 ~ 17135064 (-)
G1042500 NA other downstream 818620 16104163 ~ 16104883 (-)
G1040432 LOC106568413 other downstream 2612451 14307600 ~ 14311052 (-)
G1040300 NA other downstream 2743362 14178658 ~ 14180141 (-)
G1044482 NA other upstream 770986 17696129 ~ 17697105 (-)
G1044649 LOC106568140 other upstream 1092961 18018104 ~ 18018758 (-)
G1044671 NA other upstream 1130968 18056111 ~ 18058392 (-)
G1044692 NA other upstream 1172420 18097563 ~ 18099722 (-)

Expression


Co-expression Network