G1043545


Basic Information

Item Value
gene id G1043545
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 17077789 ~ 17135064 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1189231
tattgtgtgtagattgatgggggggaactatttaatccatttttctGTAAAAAGTCaggaggtctgaatactttccgaatgctctgtaacTCAATCACTGTTTGCAAAAAGACCATTCAATGCATGGCTGAATGTGTGCATCGTAGAGGCCTGGGCTATAGGCCATgtcaaaaacattttattttcatggGTAAAAACACATGGAGACATTaccagattattatttttttatatccCAAATGACGgggtagcctactctgctgacactgaATAACAGATCAATAAAACCACGTATGTATAATAGGCCTATGAGAAGGGGAGAAACAAATAGAATGGCATCCGTCTAAACTGGAGGAAGAAATGATTGCCCAAAAAATAactttaaagtggaactgacccAACAATGATGGAGTGAATATTTGGAGTGCGCACTCACCGGGGACATGGCCGATTTGCTCTGCTGGTGTCAATAAGGTAgtctataggcctactgttgttcACTCTATTTAAGTAGAAAATTTTGATAAGATGTTAGTCTTTCTTTACAGcaatagccatttgctttccaagcTGTTGTCCCACGATTTAATTTTTAAATATTTCGATATGCCTGGCTGGGCCTCTACTTTTCACTGACAGTCACAATCATCTATTTGGTATTTGTGTGCACTGTTTTTCCTTCCGACTGTTTGTAATGCGATTTAAAACTTGTTTATTTTTTAAGGCTAGACAACGCTAATGATCTTGtgtggccaaatcatgctttaGTGGCCTAATGAAGGATTTTATGTATTTCTCTATAGACCGGAGTAGGCTAAGTAATATTGGCAATATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1189231 True 835 lncRNA 0.38 2 17077789 17135064

Neighbor

gene id symbol gene type direction distance location
LOC110537077 LOC106568284 coding downstream 9769 17065241 ~ 17068020 (-)
LOC110537073 LOC106568283 coding downstream 13198 17042371 ~ 17064591 (-)
LOC110537074 LOC106562412 coding downstream 35884 16940427 ~ 17041905 (-)
LOC100305243 LOC106562364 coding downstream 438838 16634735 ~ 16638951 (-)
LOC110537069 LOC106568328 coding downstream 447669 16616367 ~ 16630120 (-)
LOC118937877 NA coding upstream 882 17135946 ~ 17137974 (-)
LOC110537083 elovl2 coding upstream 44423 17179487 ~ 17180486 (-)
LOC110537086 LOC106568301 coding upstream 115008 17250072 ~ 17256274 (-)
ddx55 ddx55 coding upstream 134613 17269677 ~ 17275098 (-)
LOC110537089 tmed2 coding upstream 140182 17275246 ~ 17279138 (-)
G1043548 NA non-coding downstream 23433 17053580 ~ 17054356 (-)
G1043515 NA non-coding downstream 75099 17001047 ~ 17002690 (-)
G1043488 NA non-coding downstream 152646 16923503 ~ 16925143 (-)
G1043482 LOC106562392 non-coding downstream 162118 16915326 ~ 16915671 (-)
G1043577 NA non-coding upstream 4107 17139171 ~ 17139473 (-)
G1043584 LOC106568292 non-coding upstream 20888 17155952 ~ 17156375 (-)
G1043589 NA non-coding upstream 31751 17166815 ~ 17167321 (-)
G1043567 LOC106561138 non-coding upstream 101403 17236467 ~ 17239891 (-)
G1043633 NA non-coding upstream 108433 17243497 ~ 17243760 (-)
LOC110537061 LOC106568319 other downstream 533063 16417638 ~ 16549073 (-)
LOC110537059 LOC106568318 other downstream 749675 16324956 ~ 16328168 (-)
G1042500 NA other downstream 972906 16104163 ~ 16104883 (-)
G1040432 LOC106568413 other downstream 2766737 14307600 ~ 14311052 (-)
G1044482 NA other upstream 561065 17696129 ~ 17697105 (-)
G1044649 LOC106568140 other upstream 883040 18018104 ~ 18018758 (-)
G1044671 NA other upstream 921047 18056111 ~ 18058392 (-)
G1044692 NA other upstream 962499 18097563 ~ 18099722 (-)
G1044761 NA other upstream 1057170 18192234 ~ 18193223 (-)

Expression


Co-expression Network