G1043589


Basic Information

Item Value
gene id G1043589
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 17166815 ~ 17167321 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1189286
atattataatttccgaCATTTGGTAGGACATTGTCAACAGTttgatacatgcagcttctcttctgtcataacCTTTTGCCCCAGAAGACTAAATAAAGGAGTGGTCACCAGAATAATGTCTCACatcgatagaatgaatgcatTAGTAATCTAGTTAACACCGGTAAAGTTGTCTGTTTCGTTTAGGGACTGGGGAGAAAACTCCTAAAAAGTGGTAAGATTGGTCCTatgcaaaatgtccaaatgtcATCAGTTTGACCGTTTTTAAGGAAATGATAAACTGAGAAAAACTACAAAATATGTTTCTGATAAGACTTCAGTTCGTCTTGGCTGCATattttattttgttgaaataccATCTGCTTGCATAACAGTGTCAAAGATAACACATTACAAGCACATTAACATTTTCTCAAGagatgctgaaataaataaatcatatttctccacttcTGTTCCCTAGACAAAATGTACATTTGAGTTCTAATTTCACTGCAAGATATGCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1189286 True 507 lncRNA 0.35 1 17166815 17167321

Neighbor

gene id symbol gene type direction distance location
LOC118937877 NA coding downstream 28841 17135946 ~ 17137974 (-)
LOC110537079 rilpl1 coding downstream 37636 17111763 ~ 17129179 (-)
LOC110537076 LOC106568285 coding downstream 68625 17068181 ~ 17098190 (-)
LOC110537077 LOC106568284 coding downstream 98795 17065241 ~ 17068020 (-)
LOC110537073 LOC106568283 coding downstream 102224 17042371 ~ 17064591 (-)
LOC110537083 elovl2 coding upstream 12166 17179487 ~ 17180486 (-)
LOC110537086 LOC106568301 coding upstream 82751 17250072 ~ 17256274 (-)
ddx55 ddx55 coding upstream 102356 17269677 ~ 17275098 (-)
LOC110537089 tmed2 coding upstream 107925 17275246 ~ 17279138 (-)
LOC110537091 LOC106568276 coding upstream 334883 17502204 ~ 17524387 (-)
G1043584 LOC106568292 non-coding downstream 10440 17155952 ~ 17156375 (-)
G1043577 NA non-coding downstream 27342 17139171 ~ 17139473 (-)
G1043545 NA non-coding downstream 31751 17077789 ~ 17135064 (-)
G1043550 NA non-coding downstream 81043 17059200 ~ 17085772 (-)
G1043548 NA non-coding downstream 112459 17053580 ~ 17054356 (-)
G1043567 LOC106561138 non-coding upstream 69146 17236467 ~ 17239891 (-)
G1043633 NA non-coding upstream 76176 17243497 ~ 17243760 (-)
G1043636 NA non-coding upstream 77486 17244807 ~ 17246167 (-)
G1043635 NA non-coding upstream 80200 17247521 ~ 17248292 (-)
G1043640 NA non-coding upstream 91247 17258568 ~ 17258888 (-)
LOC110537061 LOC106568319 other downstream 622089 16417638 ~ 16549073 (-)
LOC110537059 LOC106568318 other downstream 838701 16324956 ~ 16328168 (-)
G1042500 NA other downstream 1061932 16104163 ~ 16104883 (-)
G1040432 LOC106568413 other downstream 2855763 14307600 ~ 14311052 (-)
G1044482 NA other upstream 528808 17696129 ~ 17697105 (-)
G1044649 LOC106568140 other upstream 850783 18018104 ~ 18018758 (-)
G1044671 NA other upstream 888790 18056111 ~ 18058392 (-)
G1044692 NA other upstream 930242 18097563 ~ 18099722 (-)
G1044761 NA other upstream 1024913 18192234 ~ 18193223 (-)

Expression


Co-expression Network