G1043635


Basic Information

Item Value
gene id G1043635
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 17247521 ~ 17248292 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1189335
caaataaataatgaaacgttcaatttggtttaaataatacaaaacaaagtgttggagaaggaaGTAAAAGTGTGCattgtaaaaaaagctaacgtttaagttccttgctcagaacatatgaaagctggtggttccttttaacacgagtcttcaatattcccaggtaagaagttttaggttgtagttattataggactatttctctctatacctttgactattgatgTTTTtgtaggcactttagtattgccagtgtagcagtatagcttccgtccctctcctcgcccctacctggactcgaaccaggaacacatcgacaacagccaccctcgaagcatcgttacctatcgctccacaaaagccgtggcccttgcagagcaaggagaactacttcaaggtctcagagcctCATGTGGcttagcgcgcaccctgctaactggctagccatttcacatcggttacaccagcctaatcttgggagttgataggcttgaagtcataaaccgcTCAATGCTtcaagcacagcgaagagctgctagcaaatgcacgaaagtgctgtttgaatgaacgcTTACGAGCCtcctgctgcctaccaccactcagtcagactgctctatcaaatatcaaatcatagacttaattataacataataacacacagaaatacgagccttaggtcattaatatggtcaaatccggaaactataattttgtTGAAGGAATTTAAGtcctctgttttaattcccaatcaaaattaaacactctgtcaatg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1189335 True 772 lncRNA 0.41 1 17247521 17248292

Neighbor

gene id symbol gene type direction distance location
LOC110537083 elovl2 coding downstream 67035 17179487 ~ 17180486 (-)
LOC118937877 NA coding downstream 109547 17135946 ~ 17137974 (-)
LOC110537079 rilpl1 coding downstream 118342 17111763 ~ 17129179 (-)
LOC110537076 LOC106568285 coding downstream 149331 17068181 ~ 17098190 (-)
LOC110537077 LOC106568284 coding downstream 179501 17065241 ~ 17068020 (-)
LOC110537086 LOC106568301 coding upstream 1780 17250072 ~ 17256274 (-)
ddx55 ddx55 coding upstream 21385 17269677 ~ 17275098 (-)
LOC110537089 tmed2 coding upstream 26954 17275246 ~ 17279138 (-)
LOC110537091 LOC106568276 coding upstream 253912 17502204 ~ 17524387 (-)
LOC110537096 LOC106562702 coding upstream 308843 17557135 ~ 17576537 (-)
G1043636 NA non-coding downstream 1354 17244807 ~ 17246167 (-)
G1043633 NA non-coding downstream 3761 17243497 ~ 17243760 (-)
G1043567 LOC106561138 non-coding downstream 7630 17236467 ~ 17239891 (-)
G1043589 NA non-coding downstream 80200 17166815 ~ 17167321 (-)
G1043584 LOC106568292 non-coding downstream 91146 17155952 ~ 17156375 (-)
G1043640 NA non-coding upstream 10276 17258568 ~ 17258888 (-)
G1043654 NA non-coding upstream 35533 17283825 ~ 17284118 (-)
G1043643 LOC106562610 non-coding upstream 40293 17288585 ~ 17288920 (-)
G1043671 NA non-coding upstream 79671 17327963 ~ 17328188 (-)
G1043676 NA non-coding upstream 89594 17337886 ~ 17338096 (-)
LOC110537061 LOC106568319 other downstream 702795 16417638 ~ 16549073 (-)
LOC110537059 LOC106568318 other downstream 919407 16324956 ~ 16328168 (-)
G1042500 NA other downstream 1142638 16104163 ~ 16104883 (-)
G1040432 LOC106568413 other downstream 2936469 14307600 ~ 14311052 (-)
G1044482 NA other upstream 447837 17696129 ~ 17697105 (-)
G1044649 LOC106568140 other upstream 769812 18018104 ~ 18018758 (-)
G1044671 NA other upstream 807819 18056111 ~ 18058392 (-)
G1044692 NA other upstream 849271 18097563 ~ 18099722 (-)
G1044761 NA other upstream 943942 18192234 ~ 18193223 (-)

Expression


Co-expression Network