Gene
RNA
| Item | Value |
|---|---|
| gene id | G1043950 |
| gene name | LOC106568269 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 17652288 ~ 17652684 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: phosphatidylinositol 4-kinase alpha-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1189695 | True | 264 | lncRNA | 0.54 | 2 | 17652288 | 17652684 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537096 | LOC106562702 | coding | downstream | 75751 | 17557135 ~ 17576537 (-) |
| LOC110537091 | LOC106568276 | coding | downstream | 127901 | 17502204 ~ 17524387 (-) |
| LOC110537089 | tmed2 | coding | downstream | 373150 | 17275246 ~ 17279138 (-) |
| ddx55 | ddx55 | coding | downstream | 377190 | 17269677 ~ 17275098 (-) |
| LOC110537086 | LOC106568301 | coding | downstream | 396014 | 17250072 ~ 17256274 (-) |
| LOC110537100 | LOC106568268 | coding | upstream | 29101 | 17681785 ~ 17710237 (-) |
| LOC110537102 | LOC106568267 | coding | upstream | 68493 | 17721177 ~ 17729244 (-) |
| LOC110536806 | LOC106568132 | coding | upstream | 101279 | 17753963 ~ 17808512 (-) |
| LOC110537108 | LOC106563398 | coding | upstream | 207416 | 17860100 ~ 17863387 (-) |
| LOC110537109 | pp2bc | coding | upstream | 239210 | 17891894 ~ 17912969 (-) |
| G1043980 | pi4ka | non-coding | downstream | 7676 | 17643604 ~ 17644612 (-) |
| G1043887 | NA | non-coding | downstream | 25905 | 17595109 ~ 17626383 (-) |
| G1043948 | NA | non-coding | downstream | 63757 | 17583819 ~ 17588531 (-) |
| G1043879 | NA | non-coding | downstream | 165790 | 17441472 ~ 17486498 (-) |
| G1043689 | NA | non-coding | downstream | 308304 | 17343769 ~ 17343984 (-) |
| G1043986 | NA | non-coding | upstream | 18960 | 17671644 ~ 17671941 (-) |
| G1043996 | NA | non-coding | upstream | 27993 | 17680677 ~ 17680884 (-) |
| G1044486 | NA | non-coding | upstream | 50481 | 17703165 ~ 17703578 (-) |
| G1044488 | NA | non-coding | upstream | 53579 | 17706263 ~ 17706541 (-) |
| G1044513 | NA | non-coding | upstream | 76819 | 17729503 ~ 17732067 (-) |
| LOC110537077 | LOC106568284 | other | downstream | 584403 | 17065241 ~ 17068020 (-) |
| LOC110537061 | LOC106568319 | other | downstream | 1107562 | 16417638 ~ 16549073 (-) |
| LOC110537059 | LOC106568318 | other | downstream | 1324174 | 16324956 ~ 16328168 (-) |
| G1042500 | NA | other | downstream | 1547405 | 16104163 ~ 16104883 (-) |
| G1040432 | LOC106568413 | other | downstream | 3341236 | 14307600 ~ 14311052 (-) |
| G1044482 | NA | other | upstream | 43445 | 17696129 ~ 17697105 (-) |
| G1044649 | LOC106568140 | other | upstream | 365420 | 18018104 ~ 18018758 (-) |
| G1044671 | NA | other | upstream | 403427 | 18056111 ~ 18058392 (-) |
| G1044692 | NA | other | upstream | 444879 | 18097563 ~ 18099722 (-) |
| G1044761 | NA | other | upstream | 539550 | 18192234 ~ 18193223 (-) |
