G1044555


Basic Information

Item Value
gene id G1044555
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 17816159 ~ 17821883 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1190425
acaaaagtcacttgagttcactgaactcctttaccgggctggactctttttaggcccgaggtacaggacatttctggaggaaccagaactcattgtgttatattattatgtgtgtgtaatccattgatgttgctaatacaacccacgcaaaagaatacagttgtttttgaagttcttttcaatgttttaagggtttatgaaaagttgatttccctcctgacgtttacataagtcctttgtattggtgtagacttgacggaccagatgggactcattccctcccaaactaaaaggagaaaccaatgttttctctggtaggcacaacctacctggcacccctataaataataacctcaagtcaaaaccgttacaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1190425 True 374 lncRNA 0.40 2 17816159 17821883

Neighbor

gene id symbol gene type direction distance location
LOC110536806 LOC106568132 coding downstream 7647 17753963 ~ 17808512 (-)
LOC110537102 LOC106568267 coding downstream 86915 17721177 ~ 17729244 (-)
LOC110537100 LOC106568268 coding downstream 105922 17681785 ~ 17710237 (-)
LOC110537096 LOC106562702 coding downstream 239622 17557135 ~ 17576537 (-)
LOC110537091 LOC106568276 coding downstream 291772 17502204 ~ 17524387 (-)
LOC110537108 LOC106563398 coding upstream 38217 17860100 ~ 17863387 (-)
LOC110537109 pp2bc coding upstream 70011 17891894 ~ 17912969 (-)
LOC100135895 LOC100135895 coding upstream 113845 17935728 ~ 17940707 (-)
LOC118937764 NA coding upstream 140093 17961976 ~ 17964065 (-)
LOC110537114 NA coding upstream 247767 18069650 ~ 18079512 (-)
G1044553 NA non-coding downstream 952 17814974 ~ 17815207 (-)
G1044552 NA non-coding downstream 2416 17813470 ~ 17813743 (-)
G1044539 NA non-coding downstream 39257 17776409 ~ 17776902 (-)
G1044536 NA non-coding downstream 50107 17765837 ~ 17766052 (-)
G1044535 NA non-coding downstream 54986 17760886 ~ 17761173 (-)
G1044558 NA non-coding upstream 6584 17828467 ~ 17828745 (-)
G1044559 NA non-coding upstream 6975 17828858 ~ 17829320 (-)
G1044592 NA non-coding upstream 103937 17925820 ~ 17926330 (-)
G1044596 NA non-coding upstream 107972 17929855 ~ 17930090 (-)
G1044604 NA non-coding upstream 125401 17947284 ~ 17947534 (-)
G1044482 NA other downstream 119054 17696129 ~ 17697105 (-)
LOC110537077 LOC106568284 other downstream 748274 17065241 ~ 17068020 (-)
LOC110537061 LOC106568319 other downstream 1271433 16417638 ~ 16549073 (-)
LOC110537059 LOC106568318 other downstream 1488045 16324956 ~ 16328168 (-)
G1042500 NA other downstream 1711276 16104163 ~ 16104883 (-)
G1044649 LOC106568140 other upstream 196221 18018104 ~ 18018758 (-)
G1044671 NA other upstream 234228 18056111 ~ 18058392 (-)
G1044692 NA other upstream 275680 18097563 ~ 18099722 (-)
G1044761 NA other upstream 370351 18192234 ~ 18193223 (-)
LOC110537121 LOC106568150 other upstream 624798 18439759 ~ 18458056 (-)

Expression


Co-expression Network