G1044648


Basic Information

Item Value
gene id G1044648
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 18021572 ~ 18022305 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1190532
aataatattttttttctgaagATAATATGATACGTTTCATCAACTTGATTTGTAGAATAAGTTGGTCCTCAATGCATGATACATAAGCAGTGCTTAATATTCTGACATTCATGTGCATTCAACCCACAAATCTTAACATTTGCTTGCTCCAACATGTATTCTTCACACAACAGCAGTTCACCTGCCTGCTGCTATCAAGTGTAATGACAGACCTTTATAGCACTATTCCTGCAGTAGTCCTCACATAGTACAACTGTGTTCTGTAAACCTGTGGCACTCCAGTTGAGCATACAGGAAGACCTATACAGCTCATTGCCCTCATTGTCACATATGCCATATTTTCTTCAACAACTGCAACCATCTGCACTCGTTGCGCCTCTGCCCATGCCAGGATATTCACCAGAACCGCTCCAACATTTACTCAGGCTCGGTTACAGAGATGCAACAATCTGCCTTGCTTTACAGTGGGCACTGTGGTTGTGTTTCAGCCGTAGTAAGTTTCTACTGTAGTTCATTACAGTGGCAGAACCATGGTAGACTCCAAAGAGGAGAGACTTCATATGAGCAGATGAGGCCGTGACCTCAGGACGGGGTCATGGCAAGGTCACCTTGGCACGATGTAACCATATGGCTTCTGCAGACACAGAGAGCCGTGATTGGGTAGTGGGTGGCTATGGTAGTGCTCCACTAGGGCTGACAGGGAGGGAAATGTCATCTCTAACTCCAGGAACAGC

Function

NR:

description
SH3 domain-binding protein 2-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1190532 True 734 lncRNA 0.45 1 18021572 18022305

Neighbor

gene id symbol gene type direction distance location
LOC118937764 NA coding downstream 57507 17961976 ~ 17964065 (-)
LOC100135895 LOC100135895 coding downstream 80865 17935728 ~ 17940707 (-)
LOC110537109 pp2bc coding downstream 108603 17891894 ~ 17912969 (-)
LOC110537108 LOC106563398 coding downstream 158185 17860100 ~ 17863387 (-)
LOC110536806 LOC106568132 coding downstream 213060 17753963 ~ 17808512 (-)
LOC110537114 NA coding upstream 47345 18069650 ~ 18079512 (-)
LOC110537117 LOC106568145 coding upstream 77728 18100033 ~ 18100881 (-)
LOC110537118 LOC106568147 coding upstream 267665 18289970 ~ 18297738 (-)
LOC110537119 LOC106568149 coding upstream 314546 18336851 ~ 18387113 (-)
LOC110537121 LOC106568150 coding upstream 417454 18439759 ~ 18458056 (-)
G1044647 NA non-coding downstream 4155 18017196 ~ 18017417 (-)
G1044621 NA non-coding downstream 9107 17972617 ~ 18012465 (-)
G1044620 NA non-coding downstream 49138 17971978 ~ 17972434 (-)
G1044619 NA non-coding downstream 50718 17970590 ~ 17970854 (-)
G1044604 NA non-coding downstream 74038 17947284 ~ 17947534 (-)
G1044666 LOC106568141 non-coding upstream 26301 18048606 ~ 18052855 (-)
G1044678 NA non-coding upstream 49792 18072097 ~ 18072807 (-)
G1044714 NA non-coding upstream 108890 18131195 ~ 18132786 (-)
G1044734 NA non-coding upstream 135840 18158145 ~ 18158358 (-)
G1044747 NA non-coding upstream 155508 18177813 ~ 18178053 (-)
G1044649 LOC106568140 other downstream 2814 18018104 ~ 18018758 (-)
G1044482 NA other downstream 324467 17696129 ~ 17697105 (-)
LOC110537077 LOC106568284 other downstream 953687 17065241 ~ 17068020 (-)
LOC110537061 LOC106568319 other downstream 1476846 16417638 ~ 16549073 (-)
LOC110537059 LOC106568318 other downstream 1693458 16324956 ~ 16328168 (-)
G1044671 NA other upstream 33806 18056111 ~ 18058392 (-)
G1044692 NA other upstream 75258 18097563 ~ 18099722 (-)
G1044761 NA other upstream 169929 18192234 ~ 18193223 (-)
G1045201 NA other upstream 791597 18813902 ~ 18815394 (-)

Expression


Co-expression Network