G1045172



Basic Information


Item Value
gene id G1045172
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 18792021 ~ 18792235 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1191096
CCTATATATTACTATAGCATAATGGCATCTGTTATGCTCTTATTCCTACTGCGCTAATTTATTGTAGTCATAGATTGCACTCACTAATACAATTTAAATGGGACACATTGTTTGCAAATTCAAAAGTAAACCGTTTTTCTCATTGGCAAGAAACAAAAGTGTTGAAAACAAGAATCCCTTTGTATTTACTCAATTGACTCTCCATTATTATTAAG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1191096 True 215 lncRNA 0.31 1 18792021 18792235

Neighbor


gene id symbol gene type direction distance location
fgf10a LOC106568156 coding downstream 45442 18723193 ~ 18746579 (-)
ccdc80l2 LOC106568154 coding downstream 225929 18560756 ~ 18566092 (-)
LOC118937637 LOC106611709 coding downstream 234010 18545785 ~ 18558011 (-)
LOC110537126 fyb coding downstream 253396 18513211 ~ 18538625 (-)
rbp4l purp coding downstream 303348 18486339 ~ 18488673 (-)
LOC110537130 LOC106568157 coding upstream 40884 18833119 ~ 18907377 (-)
LOC110536808 NA coding upstream 145983 18938218 ~ 18949907 (-)
LOC110536809 amacr coding upstream 179180 18971415 ~ 18994913 (-)
LOC110539127 LOC106568258 coding upstream 251889 19044124 ~ 19050623 (-)
LOC110536810 LOC106568158 coding upstream 273798 19066033 ~ 19077328 (-)
G1045161 NA non-coding downstream 5450 18786307 ~ 18786571 (-)
G1045141 NA non-coding downstream 24994 18763920 ~ 18767027 (-)
G1044924 NA non-coding downstream 243431 18548214 ~ 18548590 (-)
G1044867 NA non-coding downstream 339325 18422833 ~ 18452696 (-)
G1045203 NA non-coding upstream 23276 18815511 ~ 18815929 (-)
G1045295 NA non-coding upstream 34403 18826638 ~ 18826877 (-)
G1045309 LOC100846954 non-coding upstream 65989 18858224 ~ 18858637 (-)
G1045314 NA non-coding upstream 73098 18865333 ~ 18906884 (-)
G1045330 NA non-coding upstream 88899 18881134 ~ 18881920 (-)
LOC110537121 LOC106568150 other downstream 344770 18439759 ~ 18458056 (-)
G1044761 NA other downstream 598798 18192234 ~ 18193223 (-)
G1044692 NA other downstream 692299 18097563 ~ 18099722 (-)
G1044671 NA other downstream 733629 18056111 ~ 18058392 (-)
G1044649 LOC106568140 other downstream 773263 18018104 ~ 18018758 (-)
G1045201 NA other upstream 21667 18813902 ~ 18815394 (-)
LOC110537144 LOC106568168 other upstream 764043 19550953 ~ 19569458 (-)
LOC110536814 LOC106568181 other upstream 1121604 19893417 ~ 19938584 (-)
G1047325 NA other upstream 1703330 20495565 ~ 20496428 (-)

Expression



Co-expression Network