G1045201


Basic Information

Item Value
gene id G1045201
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 18813902 ~ 18815394 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1191128
CGGCAATATTGATAGATGGCCGGAGCCATGTATCAAAGGGGGGATAGGATAGGACACTTTGTGGCCTATTGGATAATaatcaaaaaacatttttttttatagcgTTCCCAACTTACTTGGCAGACACGATTATGGTAACTGAAATATTAGGTCCAGATATTATCCCTAGAGTTGGTTTACTAGGATCTATTTCTTTAAATAATGGATGACAGTTTAGCTAATCAGGTAGCACAAATAGAAGGCCAGAGTTGGGGACCAGAACAAGTAGGCATAGAAGTTGAAGATATACTAGCAGAACACATGAGAagactgtttgttaaccaaaccCGTATGTCCAAGATATTATGCTCTACAGGTGAATTACAGGAGAAGGTGattcactcaatccagtccctgAGGAGAAAAGACGGGAAGCAGCCACATTGGGAAGGGCCATACCAAGTACTCCTGATGACAGCCTTCGCGGTGAGAATAGCTGAAAGAGCTTCCTGGGTTCATATCACACATTGCAAGAGGGTAAGACACCCTGACACTGTCGAACAATCACAGAGTTAGGAGAAGAACCTATCCCAAAAGGATTCGGGGGTTACCTCTCTAACGAAGATTCCCTGACCCCGCCCTATCCTCCCTGTGTGCGTTCATAGAAGTGAAAGTATGGGCTGGCCTTCAGCTAATGATATGTTCTCCGGGAAAGGGTGGGGCTTTACAGGAGTGCTGATTGGTCTGAGCTGTCTTATCGTGGGAGCCATAATCCTAATATACCATGACCCATCCGAGAATGTAGAAGGTGGTAACTTGACCCATAGTTTAGACAATGAGGATTTTGTATTAACTAAGCATAAGAGATCACTTGATCTGGATGAACAGGAAGTGAGAGTCTAGGACTATGAGCCATTATTGAAGATATCTGTGCAGGTCACCGTGTAGTTCATGGAAACAGGTCATAGCCCACACAGGGAGAGCGAGGGCTATATAGATCCACTTACCCAGTATGGAAGGAGGTGGAGTACAGTGAAGGTGAGAGTTTTTGGCTGCAATCCGGAGCGAGAGAAGTATTGCATAAAGGTACGTATTACTATTAAAAACGTAAAGAAAGAGGATCTAGGGTTATGGTATGTTGGATTTGatcatgttttgtttgatattcTAGTACCATTCCGGGTAGAAGAGGTTAGGGCAAGTGATAGCTCTATAGTCAGCCAGAATACAAGCAGAGCCCCTGACAAAACAGAAACTGACAGTGGAGTCGTCCAGAGCCAAGGGCCGGTGCGGATAGTGCAGATGACAGATCTTAAGGAAGTGATCGAGGTGGAAACTGGTTATGGGGATTCTAACCTATGGTTAGAATGGATTCAATATACAGCCAGATCAATAGCGAAAGAAGAATGTTATGCCTGCGCCACAGAAAAACCTCAGTTGACAACCATTCCCTTTCCATTTGATGGAATTGATTCACCCAGGGGAATGGCCGGTATGGTAAAGCTGTTCATGAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1191128 True 1493 TUCP 0.44 1 18813902 18815394

Neighbor

gene id symbol gene type direction distance location
fgf10a LOC106568156 coding downstream 67323 18723193 ~ 18746579 (-)
ccdc80l2 LOC106568154 coding downstream 247810 18560756 ~ 18566092 (-)
LOC118937637 LOC106611709 coding downstream 255891 18545785 ~ 18558011 (-)
LOC110537126 fyb coding downstream 275277 18513211 ~ 18538625 (-)
rbp4l purp coding downstream 325229 18486339 ~ 18488673 (-)
LOC110537130 LOC106568157 coding upstream 17725 18833119 ~ 18907377 (-)
LOC110536808 NA coding upstream 122824 18938218 ~ 18949907 (-)
LOC110536809 amacr coding upstream 156021 18971415 ~ 18994913 (-)
LOC110539127 LOC106568258 coding upstream 228730 19044124 ~ 19050623 (-)
LOC110536810 LOC106568158 coding upstream 250639 19066033 ~ 19077328 (-)
G1045172 NA non-coding downstream 21667 18792021 ~ 18792235 (-)
G1045161 NA non-coding downstream 27331 18786307 ~ 18786571 (-)
G1045141 NA non-coding downstream 46875 18763920 ~ 18767027 (-)
G1044924 NA non-coding downstream 265312 18548214 ~ 18548590 (-)
G1045203 NA non-coding upstream 117 18815511 ~ 18815929 (-)
G1045295 NA non-coding upstream 11244 18826638 ~ 18826877 (-)
G1045309 LOC100846954 non-coding upstream 42830 18858224 ~ 18858637 (-)
G1045314 NA non-coding upstream 49939 18865333 ~ 18906884 (-)
G1045330 NA non-coding upstream 65740 18881134 ~ 18881920 (-)
LOC110537121 LOC106568150 other downstream 366651 18439759 ~ 18458056 (-)
G1044761 NA other downstream 620679 18192234 ~ 18193223 (-)
G1044692 NA other downstream 714180 18097563 ~ 18099722 (-)
G1044671 NA other downstream 755510 18056111 ~ 18058392 (-)
G1044649 LOC106568140 other downstream 795144 18018104 ~ 18018758 (-)
LOC110537144 LOC106568168 other upstream 740884 19550953 ~ 19569458 (-)
LOC110536814 LOC106568181 other upstream 1098445 19893417 ~ 19938584 (-)
G1047325 NA other upstream 1680171 20495565 ~ 20496428 (-)
LOC110537156 LOC106568185 other upstream 1694222 20488123 ~ 20599476 (-)

Expression


Co-expression Network