G1045208


Basic Information

Item Value
gene id G1045208
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 18818710 ~ 18819343 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1191135
tctcctctctgctccccaACCATCAAGGTCTCAGCAGTGCGGGGAGAGCTTCTCTGTCTACCCTTTCTCCTATCTGTCTGTCGCTCTTTCTCATAACAGTCAGTATCAAATATGGGTTGTTTCCAAATCTCAACTAAGTGTCTCACTGTTTGGCATTATCTGAACTCATGGATTTTAGAAAAAAACATGTCTATGGTGGCAATCGCTAAAGTAATTACAAAGAGTGATTAAAGTTATCACGATCCTATCAATAATCCTGAATCACCACAGATGTCATATAACCCTGTCCTGTTGGCCTGGATTAGGTTCTAAAtacttaacctcttgaagctagggggcactatttttatgtttggaaaaataacgttcccaaagtaaacggcctatttctcaggaccagatgctagaatatgactataattgacagattaggatagaaaacactcgaaagtttccaaaactgtcaaaatattgtctgtgagtataacagaacagatattgcaggcgaaaccctgagaaaaataaAACCAGGAAGTGACCTCTATTTTGAAAattccatgttccatagcctcccattgctccatttaaagggatatcaaccagattccttttcccatcgcatcctcaaggtgtc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1191135 True 634 lncRNA 0.40 1 18818710 18819343

Neighbor

gene id symbol gene type direction distance location
nnt LOC106568155 coding upstream 170849 18578414 ~ 18647861 (+)
LOC110537124 LOC106568151 coding upstream 306655 18492792 ~ 18512055 (+)
LOC118937636 NA coding upstream 334965 18473010 ~ 18484225 (+)
si:dkey-247m21.3 LOC106568256 coding upstream 379481 18397129 ~ 18439229 (+)
tnksa LOC105014743 coding upstream 562396 18101983 ~ 18256314 (+)
LOC110539124 LOC106568242 coding downstream 113711 18933045 ~ 18935001 (+)
LOC110537131 plchb coding downstream 270810 19088010 ~ 19100184 (+)
LOC110537140 LOC106568164 coding downstream 590307 19409650 ~ 19433994 (+)
LOC110537141 LOC106568166 coding downstream 615551 19434894 ~ 19445330 (+)
LOC110537145 LOC106568170 coding downstream 752427 19571770 ~ 19576332 (+)
G1045186 NA non-coding upstream 6909 18810413 ~ 18811801 (+)
G1045168 NA non-coding upstream 27200 18791294 ~ 18791510 (+)
G1045013 NA non-coding upstream 136970 18681414 ~ 18681740 (+)
G1044343 NA non-coding upstream 280127 18536674 ~ 18538583 (+)
G1044346 NA non-coding upstream 295516 18521886 ~ 18523194 (+)
G1045210 NA non-coding downstream 1497 18820840 ~ 18821267 (+)
G1045211 NA non-coding downstream 2287 18821630 ~ 18821856 (+)
G1045212 NA non-coding downstream 2825 18822168 ~ 18822679 (+)
G1045232 NA non-coding downstream 38576 18857919 ~ 18858153 (+)
G1045233 LOC100846954 non-coding downstream 39056 18858399 ~ 18858632 (+)
G1044317 NA other upstream 425369 18392646 ~ 18393341 (+)
G1044265 NA other upstream 522308 18295930 ~ 18296402 (+)
G1044201 NA other upstream 741410 18075802 ~ 18077300 (+)
G1044056 NA other upstream 930793 17886653 ~ 17887917 (+)
G1044002 NA other upstream 1089456 17721093 ~ 17729254 (+)
G1045418 NA other downstream 146225 18965568 ~ 18965942 (+)
G1046724 NA other downstream 1324836 20144179 ~ 20147414 (+)
G1046823 NA other downstream 1463543 20282886 ~ 20293851 (+)
G1046929 NA other downstream 1689926 20509269 ~ 20511519 (+)
LOC110537158 LOC106568186 other downstream 1871484 20667957 ~ 20694090 (+)

Expression

G1045208 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 5.
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G1045208 Expression in each Bioproject

Bar chart with 19 bars.
G1045208 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 100.
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Co-expression Network