Gene
RNA
| Item | Value |
|---|---|
| gene id | G1045314 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 18865333 ~ 18906884 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1191260 | True | 369 | lncRNA | 0.52 | 2 | 18865333 | 18906884 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| fgf10a | LOC106568156 | coding | downstream | 118754 | 18723193 ~ 18746579 (-) |
| ccdc80l2 | LOC106568154 | coding | downstream | 299241 | 18560756 ~ 18566092 (-) |
| LOC118937637 | LOC106611709 | coding | downstream | 307322 | 18545785 ~ 18558011 (-) |
| LOC110537126 | fyb | coding | downstream | 326708 | 18513211 ~ 18538625 (-) |
| rbp4l | purp | coding | downstream | 376660 | 18486339 ~ 18488673 (-) |
| LOC110536808 | NA | coding | upstream | 31334 | 18938218 ~ 18949907 (-) |
| LOC110536809 | amacr | coding | upstream | 64531 | 18971415 ~ 18994913 (-) |
| LOC110539127 | LOC106568258 | coding | upstream | 137240 | 19044124 ~ 19050623 (-) |
| LOC110536810 | LOC106568158 | coding | upstream | 159149 | 19066033 ~ 19077328 (-) |
| LOC110537133 | LOC106563626 | coding | upstream | 172770 | 19079654 ~ 19085444 (-) |
| G1045309 | LOC100846954 | non-coding | downstream | 6696 | 18858224 ~ 18858637 (-) |
| G1045295 | NA | non-coding | downstream | 38456 | 18826638 ~ 18826877 (-) |
| G1045203 | NA | non-coding | downstream | 49404 | 18815511 ~ 18815929 (-) |
| G1045172 | NA | non-coding | downstream | 73098 | 18792021 ~ 18792235 (-) |
| G1045161 | NA | non-coding | downstream | 78762 | 18786307 ~ 18786571 (-) |
| G1045351 | NA | non-coding | upstream | 6196 | 18913080 ~ 18913767 (-) |
| G1045360 | NA | non-coding | upstream | 24010 | 18930894 ~ 18931267 (-) |
| G1045363 | LOC106568242 | non-coding | upstream | 26323 | 18933207 ~ 18933599 (-) |
| G1045364 | rxfp3 | non-coding | upstream | 26820 | 18933704 ~ 18933983 (-) |
| G1045365 | NA | non-coding | upstream | 27137 | 18934021 ~ 18934229 (-) |
| G1045201 | NA | other | downstream | 49939 | 18813902 ~ 18815394 (-) |
| LOC110537121 | LOC106568150 | other | downstream | 418082 | 18439759 ~ 18458056 (-) |
| G1044761 | NA | other | downstream | 672110 | 18192234 ~ 18193223 (-) |
| G1044692 | NA | other | downstream | 765611 | 18097563 ~ 18099722 (-) |
| G1044671 | NA | other | downstream | 806941 | 18056111 ~ 18058392 (-) |
| LOC110537144 | LOC106568168 | other | upstream | 649394 | 19550953 ~ 19569458 (-) |
| LOC110536814 | LOC106568181 | other | upstream | 1006955 | 19893417 ~ 19938584 (-) |
| G1047325 | NA | other | upstream | 1588681 | 20495565 ~ 20496428 (-) |
| LOC110537156 | LOC106568185 | other | upstream | 1602732 | 20488123 ~ 20599476 (-) |
| G1047473 | NA | other | upstream | 1794656 | 20701540 ~ 20702040 (-) |
