G1045330


Basic Information

Item Value
gene id G1045330
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 18881134 ~ 18881920 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1191276
gttgagtatctgcatgtcacgttcgtcgtatacataatgagcggaccaaggcgcagcgtgagtagagttccacatatttattcaAGTGAACcttcaaaaaacaacaaagaataaagaAACATGAAGTTCGTAGTGCACATAGCACTAAACCAAAatgaaacaatatcccacaaatgcaggtgggaaaaggaccacactaagtatgatccccaattacaGACAACGgtcatcagctgcctccaattgggaaccatactcacaccaacatagaaattcaagactagaacaccccctagtcacgctctgacctattGCACCATAGAGCaccccaagggctctctatggtcagggcgtgacagtacccccacccaaaggtgcggactccgactgCAAAACCTGAACCTGGATGGGGAGGGTTAGGGTGGGCAACTAgcgtcggtggcggctccggtgtgGGACGTAGCTCCCGTTCAGACCGCGGATCTGACCCTGAAGCCGGGCTGAACGCCGTGCCCGGACTGGGCACCggagcagaggaaggctccggccatggagcgggactggatgcCGTGCTTGGACTGAGCactggcgcagaggaaggctccggccatggagcgggaatggacgccgtgcctggactgggcaccggcgcagaggaaggctccagcCATGGCACCGGCGCAGGAAGCTCTGGGCCGTTGACAGTCACCAGAAGCTCTTGACCGTC

Function

NR:

description
netrin receptor UNC5B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1191276 True 727 lncRNA 0.56 2 18881134 18881920

Neighbor

gene id symbol gene type direction distance location
fgf10a LOC106568156 coding downstream 134555 18723193 ~ 18746579 (-)
ccdc80l2 LOC106568154 coding downstream 315042 18560756 ~ 18566092 (-)
LOC118937637 LOC106611709 coding downstream 323123 18545785 ~ 18558011 (-)
LOC110537126 fyb coding downstream 342509 18513211 ~ 18538625 (-)
rbp4l purp coding downstream 392461 18486339 ~ 18488673 (-)
LOC110536808 NA coding upstream 56298 18938218 ~ 18949907 (-)
LOC110536809 amacr coding upstream 89495 18971415 ~ 18994913 (-)
LOC110539127 LOC106568258 coding upstream 162204 19044124 ~ 19050623 (-)
LOC110536810 LOC106568158 coding upstream 184113 19066033 ~ 19077328 (-)
LOC110537133 LOC106563626 coding upstream 197734 19079654 ~ 19085444 (-)
G1045309 LOC100846954 non-coding downstream 22497 18858224 ~ 18858637 (-)
G1045295 NA non-coding downstream 54257 18826638 ~ 18826877 (-)
G1045203 NA non-coding downstream 65205 18815511 ~ 18815929 (-)
G1045172 NA non-coding downstream 88899 18792021 ~ 18792235 (-)
G1045161 NA non-coding downstream 94563 18786307 ~ 18786571 (-)
G1045351 NA non-coding upstream 31160 18913080 ~ 18913767 (-)
G1045360 NA non-coding upstream 48974 18930894 ~ 18931267 (-)
G1045363 LOC106568242 non-coding upstream 51287 18933207 ~ 18933599 (-)
G1045364 rxfp3 non-coding upstream 51784 18933704 ~ 18933983 (-)
G1045365 NA non-coding upstream 52101 18934021 ~ 18934229 (-)
G1045201 NA other downstream 65740 18813902 ~ 18815394 (-)
LOC110537121 LOC106568150 other downstream 433883 18439759 ~ 18458056 (-)
G1044761 NA other downstream 687911 18192234 ~ 18193223 (-)
G1044692 NA other downstream 781412 18097563 ~ 18099722 (-)
G1044671 NA other downstream 822742 18056111 ~ 18058392 (-)
LOC110537144 LOC106568168 other upstream 674358 19550953 ~ 19569458 (-)
LOC110536814 LOC106568181 other upstream 1031919 19893417 ~ 19938584 (-)
G1047325 NA other upstream 1613645 20495565 ~ 20496428 (-)
LOC110537156 LOC106568185 other upstream 1627696 20488123 ~ 20599476 (-)
G1047473 NA other upstream 1819620 20701540 ~ 20702040 (-)

Expression


Co-expression Network