Gene
RNA
| Item | Value |
|---|---|
| gene id | G1045364 |
| gene name | rxfp3 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 18933704 ~ 18933983 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| rxfp3 | Predicted to enable G protein-coupled peptide receptor activity. Predicted to be involved in neuropeptide signaling pathway. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Is expressed in female organism; hindbrain; interrenal primordium; and male organism. Orthologous to human RXFP3 (relaxin family peptide receptor 3). |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1191310 | True | 280 | lncRNA | 0.53 | 1 | 18933704 | 18933983 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537130 | LOC106568157 | coding | downstream | 26327 | 18833119 ~ 18907377 (-) |
| fgf10a | LOC106568156 | coding | downstream | 187125 | 18723193 ~ 18746579 (-) |
| ccdc80l2 | LOC106568154 | coding | downstream | 367612 | 18560756 ~ 18566092 (-) |
| LOC118937637 | LOC106611709 | coding | downstream | 375693 | 18545785 ~ 18558011 (-) |
| LOC110537126 | fyb | coding | downstream | 395079 | 18513211 ~ 18538625 (-) |
| LOC110536808 | NA | coding | upstream | 4235 | 18938218 ~ 18949907 (-) |
| LOC110536809 | amacr | coding | upstream | 37432 | 18971415 ~ 18994913 (-) |
| LOC110539127 | LOC106568258 | coding | upstream | 110141 | 19044124 ~ 19050623 (-) |
| LOC110536810 | LOC106568158 | coding | upstream | 132050 | 19066033 ~ 19077328 (-) |
| LOC110537133 | LOC106563626 | coding | upstream | 145671 | 19079654 ~ 19085444 (-) |
| G1045363 | LOC106568242 | non-coding | downstream | 105 | 18933207 ~ 18933599 (-) |
| G1045360 | NA | non-coding | downstream | 2437 | 18930894 ~ 18931267 (-) |
| G1045351 | NA | non-coding | downstream | 19937 | 18913080 ~ 18913767 (-) |
| G1045314 | NA | non-coding | downstream | 26820 | 18865333 ~ 18906884 (-) |
| G1045330 | NA | non-coding | downstream | 51784 | 18881134 ~ 18881920 (-) |
| G1045365 | NA | non-coding | upstream | 38 | 18934021 ~ 18934229 (-) |
| G1045407 | NA | non-coding | upstream | 25276 | 18959259 ~ 18959575 (-) |
| G1045426 | NA | non-coding | upstream | 38310 | 18972293 ~ 18972547 (-) |
| G1045427 | NA | non-coding | upstream | 40406 | 18974389 ~ 18974626 (-) |
| G1045429 | NA | non-coding | upstream | 43634 | 18977617 ~ 18977853 (-) |
| G1045201 | NA | other | downstream | 118310 | 18813902 ~ 18815394 (-) |
| LOC110537121 | LOC106568150 | other | downstream | 486453 | 18439759 ~ 18458056 (-) |
| G1044761 | NA | other | downstream | 740481 | 18192234 ~ 18193223 (-) |
| G1044692 | NA | other | downstream | 833982 | 18097563 ~ 18099722 (-) |
| LOC110537144 | LOC106568168 | other | upstream | 622295 | 19550953 ~ 19569458 (-) |
| LOC110536814 | LOC106568181 | other | upstream | 979856 | 19893417 ~ 19938584 (-) |
| G1047325 | NA | other | upstream | 1561582 | 20495565 ~ 20496428 (-) |
| LOC110537156 | LOC106568185 | other | upstream | 1575633 | 20488123 ~ 20599476 (-) |
| G1047473 | NA | other | upstream | 1767557 | 20701540 ~ 20702040 (-) |
