Gene
RNA
| Item | Value |
|---|---|
| gene id | G1045426 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 18972293 ~ 18972547 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1191377 | True | 255 | lncRNA | 0.41 | 1 | 18972293 | 18972547 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110536808 | NA | coding | downstream | 22386 | 18938218 ~ 18949907 (-) |
| LOC110537130 | LOC106568157 | coding | downstream | 64916 | 18833119 ~ 18907377 (-) |
| fgf10a | LOC106568156 | coding | downstream | 225714 | 18723193 ~ 18746579 (-) |
| ccdc80l2 | LOC106568154 | coding | downstream | 406201 | 18560756 ~ 18566092 (-) |
| LOC118937637 | LOC106611709 | coding | downstream | 414282 | 18545785 ~ 18558011 (-) |
| LOC110539127 | LOC106568258 | coding | upstream | 71577 | 19044124 ~ 19050623 (-) |
| LOC110536810 | LOC106568158 | coding | upstream | 93486 | 19066033 ~ 19077328 (-) |
| LOC110537133 | LOC106563626 | coding | upstream | 107107 | 19079654 ~ 19085444 (-) |
| abraxas1 | ccd98 | coding | upstream | 113805 | 19086352 ~ 19090080 (-) |
| LOC110537135 | LOC106568160 | coding | upstream | 315348 | 19287895 ~ 19291902 (-) |
| G1045407 | NA | non-coding | downstream | 12718 | 18959259 ~ 18959575 (-) |
| G1045365 | NA | non-coding | downstream | 38064 | 18934021 ~ 18934229 (-) |
| G1045364 | rxfp3 | non-coding | downstream | 38310 | 18933704 ~ 18933983 (-) |
| G1045363 | LOC106568242 | non-coding | downstream | 38694 | 18933207 ~ 18933599 (-) |
| G1045360 | NA | non-coding | downstream | 41026 | 18930894 ~ 18931267 (-) |
| G1045427 | NA | non-coding | upstream | 1842 | 18974389 ~ 18974626 (-) |
| G1045429 | NA | non-coding | upstream | 5070 | 18977617 ~ 18977853 (-) |
| G1045431 | NA | non-coding | upstream | 6569 | 18979116 ~ 18979377 (-) |
| G1045433 | NA | non-coding | upstream | 11426 | 18983973 ~ 18984225 (-) |
| G1045435 | NA | non-coding | upstream | 11829 | 18984376 ~ 18984597 (-) |
| G1045201 | NA | other | downstream | 156899 | 18813902 ~ 18815394 (-) |
| LOC110537121 | LOC106568150 | other | downstream | 525042 | 18439759 ~ 18458056 (-) |
| G1044761 | NA | other | downstream | 779070 | 18192234 ~ 18193223 (-) |
| G1044692 | NA | other | downstream | 872571 | 18097563 ~ 18099722 (-) |
| LOC110537144 | LOC106568168 | other | upstream | 583731 | 19550953 ~ 19569458 (-) |
| LOC110536814 | LOC106568181 | other | upstream | 941292 | 19893417 ~ 19938584 (-) |
| G1047325 | NA | other | upstream | 1523018 | 20495565 ~ 20496428 (-) |
| LOC110537156 | LOC106568185 | other | upstream | 1537069 | 20488123 ~ 20599476 (-) |
| G1047473 | NA | other | upstream | 1728993 | 20701540 ~ 20702040 (-) |
