G1045428


Basic Information

Item Value
gene id G1045428
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 18976773 ~ 18977067 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1191379
ggttagtacactcagcccttgcctcccagattgccgtgccccactcacgagcccgtccaataaggagagatatgacgtaggcgacacgagcagtgctccctggagtaagtgttgggctggagagaaaacacaatatcacactgggtgaggaacgagcggcattcagtgggctccccagagtaacacggcgggttattgattctgggctccggagattcgaaagccctggaagtggccggtggatcgaggcggagatggtgaacctgttctgtgaggttggagacttgggtggcca

Function

NR:

description
PREDICTED: protein LDOC1-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1191379 True 295 lncRNA 0.57 1 18976773 18977067

Neighbor

gene id symbol gene type direction distance location
LOC110539124 LOC106568242 coding upstream 41772 18933045 ~ 18935001 (+)
nnt LOC106568155 coding upstream 328912 18578414 ~ 18647861 (+)
LOC110537124 LOC106568151 coding upstream 464718 18492792 ~ 18512055 (+)
LOC118937636 NA coding upstream 493028 18473010 ~ 18484225 (+)
si:dkey-247m21.3 LOC106568256 coding upstream 537544 18397129 ~ 18439229 (+)
LOC110537131 plchb coding downstream 113086 19088010 ~ 19100184 (+)
LOC110537140 LOC106568164 coding downstream 432583 19409650 ~ 19433994 (+)
LOC110537141 LOC106568166 coding downstream 457827 19434894 ~ 19445330 (+)
LOC110537145 LOC106568170 coding downstream 594703 19571770 ~ 19576332 (+)
LOC110537147 LOC106568174 coding downstream 647171 19624238 ~ 19644638 (+)
G1045408 NA non-coding upstream 15623 18960528 ~ 18961150 (+)
G1045359 NA non-coding upstream 45448 18930803 ~ 18931325 (+)
G1045356 NA non-coding upstream 54445 18922108 ~ 18922328 (+)
G1045281 NA non-coding upstream 56192 18920339 ~ 18920581 (+)
G1045432 NA non-coding downstream 6525 18983592 ~ 18983881 (+)
G1045453 NA non-coding downstream 19068 18996135 ~ 18996358 (+)
G1045463 NA non-coding downstream 26204 19003271 ~ 19003562 (+)
G1045502 NA non-coding downstream 60818 19037885 ~ 19038126 (+)
G1045418 NA other upstream 10831 18965568 ~ 18965942 (+)
G1044317 NA other upstream 583432 18392646 ~ 18393341 (+)
G1044265 NA other upstream 680371 18295930 ~ 18296402 (+)
G1044201 NA other upstream 899473 18075802 ~ 18077300 (+)
G1044056 NA other upstream 1088856 17886653 ~ 17887917 (+)
G1046724 NA other downstream 1167112 20144179 ~ 20147414 (+)
G1046823 NA other downstream 1305819 20282886 ~ 20293851 (+)
G1046929 NA other downstream 1532202 20509269 ~ 20511519 (+)
LOC110537158 LOC106568186 other downstream 1713760 20667957 ~ 20694090 (+)
G1048417 LOC106568221 other downstream 2856027 21833094 ~ 21834812 (+)

Expression


Co-expression Network