Gene
RNA
| Item | Value |
|---|---|
| gene id | G1045429 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 18977617 ~ 18977853 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1191380 | True | 237 | lncRNA | 0.59 | 1 | 18977617 | 18977853 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110536808 | NA | coding | downstream | 27710 | 18938218 ~ 18949907 (-) |
| LOC110537130 | LOC106568157 | coding | downstream | 70240 | 18833119 ~ 18907377 (-) |
| fgf10a | LOC106568156 | coding | downstream | 231038 | 18723193 ~ 18746579 (-) |
| ccdc80l2 | LOC106568154 | coding | downstream | 411525 | 18560756 ~ 18566092 (-) |
| LOC118937637 | LOC106611709 | coding | downstream | 419606 | 18545785 ~ 18558011 (-) |
| LOC110539127 | LOC106568258 | coding | upstream | 66271 | 19044124 ~ 19050623 (-) |
| LOC110536810 | LOC106568158 | coding | upstream | 88180 | 19066033 ~ 19077328 (-) |
| LOC110537133 | LOC106563626 | coding | upstream | 101801 | 19079654 ~ 19085444 (-) |
| abraxas1 | ccd98 | coding | upstream | 108499 | 19086352 ~ 19090080 (-) |
| LOC110537135 | LOC106568160 | coding | upstream | 310042 | 19287895 ~ 19291902 (-) |
| G1045427 | NA | non-coding | downstream | 2991 | 18974389 ~ 18974626 (-) |
| G1045426 | NA | non-coding | downstream | 5070 | 18972293 ~ 18972547 (-) |
| G1045407 | NA | non-coding | downstream | 18042 | 18959259 ~ 18959575 (-) |
| G1045365 | NA | non-coding | downstream | 43388 | 18934021 ~ 18934229 (-) |
| G1045364 | rxfp3 | non-coding | downstream | 43634 | 18933704 ~ 18933983 (-) |
| G1045431 | NA | non-coding | upstream | 1263 | 18979116 ~ 18979377 (-) |
| G1045433 | NA | non-coding | upstream | 6120 | 18983973 ~ 18984225 (-) |
| G1045435 | NA | non-coding | upstream | 6523 | 18984376 ~ 18984597 (-) |
| G1045448 | NA | non-coding | upstream | 14351 | 18992204 ~ 18992424 (-) |
| G1045495 | NA | non-coding | upstream | 54028 | 19031881 ~ 19032142 (-) |
| G1045201 | NA | other | downstream | 162223 | 18813902 ~ 18815394 (-) |
| LOC110537121 | LOC106568150 | other | downstream | 530366 | 18439759 ~ 18458056 (-) |
| G1044761 | NA | other | downstream | 784394 | 18192234 ~ 18193223 (-) |
| G1044692 | NA | other | downstream | 877895 | 18097563 ~ 18099722 (-) |
| LOC110537144 | LOC106568168 | other | upstream | 578425 | 19550953 ~ 19569458 (-) |
| LOC110536814 | LOC106568181 | other | upstream | 935986 | 19893417 ~ 19938584 (-) |
| G1047325 | NA | other | upstream | 1517712 | 20495565 ~ 20496428 (-) |
| LOC110537156 | LOC106568185 | other | upstream | 1531763 | 20488123 ~ 20599476 (-) |
| G1047473 | NA | other | upstream | 1723687 | 20701540 ~ 20702040 (-) |
