Gene
RNA
| Item | Value |
|---|---|
| gene id | G1046243 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 19540986 ~ 19541232 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| tubulin tyrosine ligase-like family member 6a |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1192349 | True | 247 | lncRNA | 0.49 | 1 | 19540986 | 19541232 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537143 | LOC106568167 | coding | downstream | 5805 | 19459368 ~ 19535181 (-) |
| LOC101268945 | LOC106568165 | coding | downstream | 91767 | 19445394 ~ 19449219 (-) |
| LOC110537139 | ppp1r3b | coding | downstream | 132704 | 19372135 ~ 19408282 (-) |
| LOC110537138 | thex1 | coding | downstream | 188510 | 19349578 ~ 19352476 (-) |
| LOC110537137 | LOC106568162 | coding | downstream | 192520 | 19307196 ~ 19348466 (-) |
| LOC110537144 | LOC106568168 | coding | upstream | 9721 | 19550953 ~ 19569458 (-) |
| LOC118937638 | NA | coding | upstream | 37173 | 19578405 ~ 19580234 (-) |
| LOC110537146 | LOC106568171 | coding | upstream | 39671 | 19580903 ~ 19606084 (-) |
| LOC110539128 | LOC106568259 | coding | upstream | 205079 | 19746311 ~ 19747504 (-) |
| LOC110536814 | LOC106568181 | coding | upstream | 356096 | 19893417 ~ 19938584 (-) |
| G1046242 | NA | non-coding | downstream | 364 | 19540352 ~ 19540622 (-) |
| G1046201 | NA | non-coding | downstream | 39601 | 19500048 ~ 19501385 (-) |
| G1046230 | NA | non-coding | downstream | 57679 | 19483002 ~ 19483307 (-) |
| G1046214 | NA | non-coding | downstream | 99657 | 19441119 ~ 19441329 (-) |
| G1046197 | NA | non-coding | downstream | 120584 | 19419802 ~ 19420402 (-) |
| G1046248 | NA | non-coding | upstream | 35131 | 19576363 ~ 19576885 (-) |
| G1046252 | NA | non-coding | upstream | 36711 | 19577943 ~ 19578377 (-) |
| G1046295 | NA | non-coding | upstream | 100594 | 19641826 ~ 19644593 (-) |
| LOC110537130 | LOC106568157 | other | downstream | 635880 | 18833119 ~ 18907377 (-) |
| G1045201 | NA | other | downstream | 725592 | 18813902 ~ 18815394 (-) |
| LOC110537121 | LOC106568150 | other | downstream | 1093735 | 18439759 ~ 18458056 (-) |
| G1044761 | NA | other | downstream | 1347763 | 18192234 ~ 18193223 (-) |
| G1044692 | NA | other | downstream | 1441264 | 18097563 ~ 18099722 (-) |
| G1047325 | NA | other | upstream | 954333 | 20495565 ~ 20496428 (-) |
| LOC110537156 | LOC106568185 | other | upstream | 968384 | 20488123 ~ 20599476 (-) |
| G1047473 | NA | other | upstream | 1160308 | 20701540 ~ 20702040 (-) |
