G1046018


Basic Information

Item Value
gene id G1046018
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 19546906 ~ 19547173 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1192038
atctatgtacagtgtgtgcaaatgtagaggAGGACGGAGGTAGACAATAAATAGGctatagaggtgaaataattgcaatttagcattaatactggagtgatagatgtgcagatgatgatgtgcaagtagagatactggggtgcaaaagagcaagagggtaagtaataaaatggggatgaggtagttgggtgtgctatttacagattggctgtgtacaggtacagtgctctgacagctgatactAAAGTTAGAGGGGGAGATATAAGAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1192038 True 268 lncRNA 0.41 1 19546906 19547173

Neighbor

gene id symbol gene type direction distance location
LOC110537141 LOC106568166 coding upstream 101576 19434894 ~ 19445330 (+)
LOC110537140 LOC106568164 coding upstream 112912 19409650 ~ 19433994 (+)
LOC110537131 plchb coding upstream 447949 19088010 ~ 19100184 (+)
LOC110539124 LOC106568242 coding upstream 611905 18933045 ~ 18935001 (+)
nnt LOC106568155 coding upstream 899045 18578414 ~ 18647861 (+)
LOC110537145 LOC106568170 coding downstream 24597 19571770 ~ 19576332 (+)
LOC110537147 LOC106568174 coding downstream 77065 19624238 ~ 19644638 (+)
LOC110537148 LOC106568173 coding downstream 98794 19645967 ~ 19711463 (+)
LOC110536811 LOC106563918 coding downstream 178991 19726164 ~ 19745172 (+)
LOC110536812 LOC106568176 coding downstream 200868 19748041 ~ 19769545 (+)
G1046010 NA non-coding upstream 9639 19537023 ~ 19537267 (+)
G1045967 LOC106568167 non-coding upstream 59138 19487310 ~ 19487768 (+)
G1045966 LOC106568167 non-coding upstream 59704 19486974 ~ 19487202 (+)
G1045962 NA non-coding upstream 67009 19479540 ~ 19479897 (+)
G1045961 NA non-coding upstream 67406 19479278 ~ 19479500 (+)
G1046020 NA non-coding downstream 3794 19550967 ~ 19554028 (+)
G1046021 NA non-coding downstream 7708 19554881 ~ 19555317 (+)
G1045972 NA non-coding downstream 30595 19577768 ~ 19578310 (+)
G1046423 NA non-coding downstream 278150 19825323 ~ 19825679 (+)
G1045418 NA other upstream 580964 18965568 ~ 18965942 (+)
G1044317 NA other upstream 1153565 18392646 ~ 18393341 (+)
G1044265 NA other upstream 1250504 18295930 ~ 18296402 (+)
G1044201 NA other upstream 1469606 18075802 ~ 18077300 (+)
G1044056 NA other upstream 1658989 17886653 ~ 17887917 (+)
G1046724 NA other downstream 597006 20144179 ~ 20147414 (+)
G1046823 NA other downstream 735713 20282886 ~ 20293851 (+)
G1046929 NA other downstream 962096 20509269 ~ 20511519 (+)
LOC110537158 LOC106568186 other downstream 1143654 20667957 ~ 20694090 (+)
G1048417 LOC106568221 other downstream 2285921 21833094 ~ 21834812 (+)

Expression


Co-expression Network