Gene
RNA
| Item | Value |
|---|---|
| gene id | G1046541 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 19876252 ~ 19876478 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| mothers against decapentaplegic homolog 4-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1192696 | True | 227 | lncRNA | 0.49 | 1 | 19876252 | 19876478 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110539128 | LOC106568259 | coding | downstream | 128748 | 19746311 ~ 19747504 (-) |
| LOC110537146 | LOC106568171 | coding | downstream | 270168 | 19580903 ~ 19606084 (-) |
| LOC118937638 | NA | coding | downstream | 296018 | 19578405 ~ 19580234 (-) |
| LOC110537144 | LOC106568168 | coding | downstream | 306794 | 19550953 ~ 19569458 (-) |
| LOC110537143 | LOC106568167 | coding | downstream | 341071 | 19459368 ~ 19535181 (-) |
| LOC110536814 | LOC106568181 | coding | upstream | 20850 | 19893417 ~ 19938584 (-) |
| LOC110537153 | LOC106568182 | coding | upstream | 65028 | 19941506 ~ 19978680 (-) |
| LOC110536815 | LOC106568184 | coding | upstream | 497857 | 20374335 ~ 20487549 (-) |
| LOC110537156 | LOC106568185 | coding | upstream | 611645 | 20488123 ~ 20599476 (-) |
| LOC110537157 | LOC101448024 | coding | upstream | 731495 | 20607973 ~ 20638681 (-) |
| G1046540 | NA | non-coding | downstream | 184 | 19875822 ~ 19876068 (-) |
| G1046539 | NA | non-coding | downstream | 1333 | 19874464 ~ 19874919 (-) |
| G1046538 | LOC106568180 | non-coding | downstream | 2453 | 19873441 ~ 19873799 (-) |
| G1046537 | NA | non-coding | downstream | 3431 | 19872552 ~ 19872821 (-) |
| G1046456 | NA | non-coding | downstream | 19804 | 19856188 ~ 19856448 (-) |
| G1046542 | NA | non-coding | upstream | 70 | 19876548 ~ 19876784 (-) |
| G1046543 | NA | non-coding | upstream | 476 | 19876954 ~ 19877271 (-) |
| G1046545 | NA | non-coding | upstream | 1888 | 19878366 ~ 19879122 (-) |
| G1046554 | NA | non-coding | upstream | 10825 | 19887303 ~ 19887637 (-) |
| G1046556 | NA | non-coding | upstream | 12109 | 19888587 ~ 19888836 (-) |
| LOC110537130 | LOC106568157 | other | downstream | 971146 | 18833119 ~ 18907377 (-) |
| G1045201 | NA | other | downstream | 1060858 | 18813902 ~ 18815394 (-) |
| LOC110537121 | LOC106568150 | other | downstream | 1429001 | 18439759 ~ 18458056 (-) |
| G1044761 | NA | other | downstream | 1683029 | 18192234 ~ 18193223 (-) |
| G1047325 | NA | other | upstream | 619087 | 20495565 ~ 20496428 (-) |
| G1047473 | NA | other | upstream | 825062 | 20701540 ~ 20702040 (-) |
| LOC110537162 | LOC106568189 | other | upstream | 986114 | 20862558 ~ 20888980 (-) |
