Gene
RNA
| Item | Value |
|---|---|
| gene id | G1046554 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 19887303 ~ 19887637 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: mothers against decapentaplegic homolog 4-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1192709 | True | 335 | lncRNA | 0.52 | 1 | 19887303 | 19887637 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110539128 | LOC106568259 | coding | downstream | 139799 | 19746311 ~ 19747504 (-) |
| LOC110537146 | LOC106568171 | coding | downstream | 281219 | 19580903 ~ 19606084 (-) |
| LOC118937638 | NA | coding | downstream | 307069 | 19578405 ~ 19580234 (-) |
| LOC110537144 | LOC106568168 | coding | downstream | 317845 | 19550953 ~ 19569458 (-) |
| LOC110537143 | LOC106568167 | coding | downstream | 352122 | 19459368 ~ 19535181 (-) |
| LOC110536814 | LOC106568181 | coding | upstream | 9691 | 19893417 ~ 19938584 (-) |
| LOC110537153 | LOC106568182 | coding | upstream | 53869 | 19941506 ~ 19978680 (-) |
| LOC110536815 | LOC106568184 | coding | upstream | 486698 | 20374335 ~ 20487549 (-) |
| LOC110537156 | LOC106568185 | coding | upstream | 600486 | 20488123 ~ 20599476 (-) |
| LOC110537157 | LOC101448024 | coding | upstream | 720336 | 20607973 ~ 20638681 (-) |
| G1046545 | NA | non-coding | downstream | 8181 | 19878366 ~ 19879122 (-) |
| G1046543 | NA | non-coding | downstream | 10032 | 19876954 ~ 19877271 (-) |
| G1046542 | NA | non-coding | downstream | 10519 | 19876548 ~ 19876784 (-) |
| G1046541 | NA | non-coding | downstream | 10825 | 19876252 ~ 19876478 (-) |
| G1046540 | NA | non-coding | downstream | 11235 | 19875822 ~ 19876068 (-) |
| G1046556 | NA | non-coding | upstream | 950 | 19888587 ~ 19888836 (-) |
| G1046558 | LOC107575789 | non-coding | upstream | 2643 | 19890280 ~ 19890515 (-) |
| G1046559 | NA | non-coding | upstream | 3415 | 19891052 ~ 19891866 (-) |
| G1046560 | NA | non-coding | upstream | 5060 | 19892697 ~ 19892936 (-) |
| LOC110537130 | LOC106568157 | other | downstream | 982197 | 18833119 ~ 18907377 (-) |
| G1045201 | NA | other | downstream | 1071909 | 18813902 ~ 18815394 (-) |
| LOC110537121 | LOC106568150 | other | downstream | 1440052 | 18439759 ~ 18458056 (-) |
| G1044761 | NA | other | downstream | 1694080 | 18192234 ~ 18193223 (-) |
| G1047325 | NA | other | upstream | 607928 | 20495565 ~ 20496428 (-) |
| G1047473 | NA | other | upstream | 813903 | 20701540 ~ 20702040 (-) |
| LOC110537162 | LOC106568189 | other | upstream | 974955 | 20862558 ~ 20888980 (-) |
