G1046559


Basic Information

Item Value
gene id G1046559
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 19891052 ~ 19891866 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1192714
AATTTAAGTCCGTGATGTGAACACCATCTTCCAAAAGCTCTGGCCTGGATCACACTCATTGCTACAAAAGCTGAATATTCTGAGACACACATACCTACTTTCAAATATAAATGTGGAAACCACCCTCACACTGTATATCAAATACATTTTCTAAACAATCAACAAGACACAACATACTGAAAACAAGCACATGAAAAGTAAACCAATAAAGTTCTCATTTAAGCTaatgtcatttaaaaaacatAGCATTGACAACtcaaaaatacagtatataaactgACATGAATAGGAAGATATGAAAATAGATATTTATGAATAGAAAAAAAGAGAATGAAAAGCATCCATGAGTCATGACTGTGTATCCTGATTCTGAGGCGAGTAGAAAACGGATTCATGAGCTGGTATCTTCAGAGCGGAAACTCTGGCTAGCTGTGATGCCAGCGGGTAGAAAATATAAATCATATATATTCCTCTGCTCTCTCATCCCATTCAGCACAGCAGACAGCGGGATGATAAATAGTTAAGATGGACTAGCCTACGGGGCATGGGCAGTCCATCAGTCAGTTCAAGGGTTGGCTGGCTATGGACAGTTCGTGAATGTGTTGCAGTTCTATAACTCAGTCCAAGGGCTGAGGGTCAGCGATGGGCATGGTGTGCAGCACCTCATCCAGTAGCTGCAGGGCCCGGTGGAGATGGATCTCAATCCAGCACGGTGTCTCCTTGATGCTCTGCCGGGGGTAGTCAGGCCCCCAGCCCTTCACAAAACTCATTCTCAGGATACACAGCCTGCGCAGGTCATCCACTCCTATACCCGC

Function

NR:

description
PREDICTED: mothers against decapentaplegic homolog 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1192714 True 815 lncRNA 0.43 1 19891052 19891866

Neighbor

gene id symbol gene type direction distance location
LOC110539128 LOC106568259 coding downstream 143548 19746311 ~ 19747504 (-)
LOC110537146 LOC106568171 coding downstream 284968 19580903 ~ 19606084 (-)
LOC118937638 NA coding downstream 310818 19578405 ~ 19580234 (-)
LOC110537144 LOC106568168 coding downstream 321594 19550953 ~ 19569458 (-)
LOC110537143 LOC106568167 coding downstream 355871 19459368 ~ 19535181 (-)
LOC110536814 LOC106568181 coding upstream 5462 19893417 ~ 19938584 (-)
LOC110537153 LOC106568182 coding upstream 49640 19941506 ~ 19978680 (-)
LOC110536815 LOC106568184 coding upstream 482469 20374335 ~ 20487549 (-)
LOC110537156 LOC106568185 coding upstream 596257 20488123 ~ 20599476 (-)
LOC110537157 LOC101448024 coding upstream 716107 20607973 ~ 20638681 (-)
G1046558 LOC107575789 non-coding downstream 537 19890280 ~ 19890515 (-)
G1046556 NA non-coding downstream 2216 19888587 ~ 19888836 (-)
G1046554 NA non-coding downstream 3415 19887303 ~ 19887637 (-)
G1046545 NA non-coding downstream 11930 19878366 ~ 19879122 (-)
G1046543 NA non-coding downstream 13781 19876954 ~ 19877271 (-)
G1046560 NA non-coding upstream 831 19892697 ~ 19892936 (-)
G1046574 NA non-coding upstream 18967 19910833 ~ 19911105 (-)
G1046615 NA non-coding upstream 102490 19994356 ~ 19994583 (-)
G1046630 NA non-coding upstream 118954 20010820 ~ 20011105 (-)
LOC110537130 LOC106568157 other downstream 985946 18833119 ~ 18907377 (-)
G1045201 NA other downstream 1075658 18813902 ~ 18815394 (-)
LOC110537121 LOC106568150 other downstream 1443801 18439759 ~ 18458056 (-)
G1044761 NA other downstream 1697829 18192234 ~ 18193223 (-)
G1047325 NA other upstream 603699 20495565 ~ 20496428 (-)
G1047473 NA other upstream 809674 20701540 ~ 20702040 (-)
LOC110537162 LOC106568189 other upstream 970726 20862558 ~ 20888980 (-)

Expression


Co-expression Network