Gene
RNA
| Item | Value |
|---|---|
| gene id | G1046630 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 20010820 ~ 20011105 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1192792 | True | 286 | lncRNA | 0.52 | 1 | 20010820 | 20011105 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537153 | LOC106568182 | coding | downstream | 32140 | 19941506 ~ 19978680 (-) |
| LOC110536814 | LOC106568181 | coding | downstream | 72236 | 19893417 ~ 19938584 (-) |
| LOC110539128 | LOC106568259 | coding | downstream | 263316 | 19746311 ~ 19747504 (-) |
| LOC110537146 | LOC106568171 | coding | downstream | 404736 | 19580903 ~ 19606084 (-) |
| LOC118937638 | NA | coding | downstream | 430586 | 19578405 ~ 19580234 (-) |
| LOC110536815 | LOC106568184 | coding | upstream | 363230 | 20374335 ~ 20487549 (-) |
| LOC110537156 | LOC106568185 | coding | upstream | 477018 | 20488123 ~ 20599476 (-) |
| LOC110537157 | LOC101448024 | coding | upstream | 596868 | 20607973 ~ 20638681 (-) |
| LOC110537159 | LOC106568248 | coding | upstream | 778750 | 20789855 ~ 20797912 (-) |
| gltp | LOC106568188 | coding | upstream | 843721 | 20854826 ~ 20857785 (-) |
| G1046615 | NA | non-coding | downstream | 16237 | 19994356 ~ 19994583 (-) |
| G1046574 | NA | non-coding | downstream | 99715 | 19910833 ~ 19911105 (-) |
| G1046560 | NA | non-coding | downstream | 117884 | 19892697 ~ 19892936 (-) |
| G1046559 | NA | non-coding | downstream | 118954 | 19891052 ~ 19891866 (-) |
| G1047041 | NA | non-coding | upstream | 51409 | 20062514 ~ 20086968 (-) |
| G1047175 | NA | non-coding | upstream | 247756 | 20258861 ~ 20259396 (-) |
| G1047188 | NA | non-coding | upstream | 359045 | 20370150 ~ 20373667 (-) |
| G1047284 | NA | non-coding | upstream | 422546 | 20433651 ~ 20434637 (-) |
| G1047305 | NA | non-coding | upstream | 453582 | 20464687 ~ 20464906 (-) |
| LOC110537144 | LOC106568168 | other | downstream | 452151 | 19550953 ~ 19569458 (-) |
| LOC110537130 | LOC106568157 | other | downstream | 1105714 | 18833119 ~ 18907377 (-) |
| G1045201 | NA | other | downstream | 1195426 | 18813902 ~ 18815394 (-) |
| LOC110537121 | LOC106568150 | other | downstream | 1563569 | 18439759 ~ 18458056 (-) |
| G1047325 | NA | other | upstream | 484460 | 20495565 ~ 20496428 (-) |
| G1047473 | NA | other | upstream | 690435 | 20701540 ~ 20702040 (-) |
| LOC110537162 | LOC106568189 | other | upstream | 851487 | 20862558 ~ 20888980 (-) |
| LOC110537166 | srsf9 | other | upstream | 922856 | 20933954 ~ 20938307 (-) |
