G1046637


Basic Information

Item Value
gene id G1046637
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 20015604 ~ 20016009 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1192799
GGTTAAGCACgggcaaaatcctggaggaaaacctggttcagtctgctttccaacagacactggaagatgaatccacctttcagcagaacaataaactaaaacacaaggccaaatctacactggagttgtttaccaagaaaacagtgaatgttcctgagtggcagagttacagttttgacttaatacttgaaaatctatggcaagacctgaaaatgggtgtctagcaatgatcaacaaccaatatgAGAGAGCTctaagaattttgaaaagaataatgggcaaatgttgcacaggTATGGaaagctcttatagacttacccagaaagactcacagctgtattcactgccaaaggtgcttctgcaaagtattgactcaggggtgtgaatatttatgtaaattatatac

Function

NR:

description
Transposable element Tcb1 transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1192799 True 406 lncRNA 0.39 1 20015604 20016009

Neighbor

gene id symbol gene type direction distance location
LOC110537152 LOC106568180 coding upstream 123024 19872474 ~ 19892580 (+)
LOC110537151 LOC106568178 coding upstream 146413 19866332 ~ 19869191 (+)
LOC110536813 LOC106568177 coding upstream 163309 19847408 ~ 19852295 (+)
LOC110537150 LOC106568245 coding upstream 194596 19790016 ~ 19821008 (+)
LOC110536812 LOC106568176 coding upstream 246059 19748041 ~ 19769545 (+)
LOC118937812 NA coding downstream 5028 20021037 ~ 20026169 (+)
LOC110537154 LOC106568183 coding downstream 91337 20107346 ~ 20370543 (+)
LOC110537158 LOC106568186 coding downstream 651948 20667957 ~ 20694090 (+)
LOC118937641 NA coding downstream 780105 20796080 ~ 20801052 (+)
LOC110537160 LOC106564165 coding downstream 788016 20804025 ~ 20846262 (+)
G1046632 NA non-coding upstream 1883 20013494 ~ 20013721 (+)
G1046616 NA non-coding upstream 20018 19995383 ~ 19995586 (+)
G1046614 NA non-coding upstream 21875 19993522 ~ 19993729 (+)
G1046473 NA non-coding upstream 64890 19947311 ~ 19950714 (+)
G1046500 NA non-coding upstream 73489 19939461 ~ 19942115 (+)
G1046714 NA non-coding downstream 109521 20125530 ~ 20126627 (+)
G1046754 NA non-coding downstream 181297 20197306 ~ 20202274 (+)
G1046793 NA non-coding downstream 231029 20247038 ~ 20279081 (+)
G1046849 NA non-coding downstream 319099 20335108 ~ 20335635 (+)
G1046897 NA non-coding downstream 399090 20415099 ~ 20415340 (+)
G1045418 NA other upstream 1049662 18965568 ~ 18965942 (+)
G1044317 NA other upstream 1622263 18392646 ~ 18393341 (+)
G1044265 NA other upstream 1719202 18295930 ~ 18296402 (+)
G1044201 NA other upstream 1938304 18075802 ~ 18077300 (+)
G1044056 NA other upstream 2127687 17886653 ~ 17887917 (+)
G1046724 NA other downstream 128170 20144179 ~ 20147414 (+)
G1046823 NA other downstream 266877 20282886 ~ 20293851 (+)
G1046929 NA other downstream 493260 20509269 ~ 20511519 (+)
G1048417 LOC106568221 other downstream 1817085 21833094 ~ 21834812 (+)

Expression


Co-expression Network