G1047041


Basic Information

Item Value
gene id G1047041
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 20062514 ~ 20086968 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1193252
gttgctaactcagcggctaggaggtatcacttctgtagtgaataagagttcaaagttcataccattcgcaaccaaagctcacgctgatgttggcttcgttctgtagttattatctgaaccattctgacatcggaccgtcgtccccacatcctcggaacaggaggttatattgtcgtcaatgctttatataggaagggagaggagggcgtgtttgaaaagttttatagcccatgtcccttcacaggggcgggccactgattgagcagagccctaccttatgaaaacccaaatctcacattttagaagctaaaatcacatttcatcccatcacgaataatttcatattcaaacatttaaattgaacaacaattccatgtgaatccgataactctgatgtgtagactttccactgtagagtttgtagagtttatgtaatcttatcattgatgagaatgtctcagatgacaaccgaactgacatcatattcattaagtaccaccgcatatgttcaattgttcggattaccagaatatagttcatttcctcCCAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1193252 True 550 lncRNA 0.41 2 20062514 20086968

Neighbor

gene id symbol gene type direction distance location
LOC110537153 LOC106568182 coding downstream 83834 19941506 ~ 19978680 (-)
LOC110536814 LOC106568181 coding downstream 123930 19893417 ~ 19938584 (-)
LOC110539128 LOC106568259 coding downstream 315010 19746311 ~ 19747504 (-)
LOC110537146 LOC106568171 coding downstream 456430 19580903 ~ 19606084 (-)
LOC118937638 NA coding downstream 482280 19578405 ~ 19580234 (-)
LOC110536815 LOC106568184 coding upstream 287367 20374335 ~ 20487549 (-)
LOC110537156 LOC106568185 coding upstream 401155 20488123 ~ 20599476 (-)
LOC110537157 LOC101448024 coding upstream 521005 20607973 ~ 20638681 (-)
LOC110537159 LOC106568248 coding upstream 702887 20789855 ~ 20797912 (-)
gltp LOC106568188 coding upstream 767858 20854826 ~ 20857785 (-)
G1046630 NA non-coding downstream 51409 20010820 ~ 20011105 (-)
G1046615 NA non-coding downstream 67931 19994356 ~ 19994583 (-)
G1046574 NA non-coding downstream 151409 19910833 ~ 19911105 (-)
G1046560 NA non-coding downstream 169578 19892697 ~ 19892936 (-)
G1047175 NA non-coding upstream 171893 20258861 ~ 20259396 (-)
G1047188 NA non-coding upstream 283182 20370150 ~ 20373667 (-)
G1047284 NA non-coding upstream 346683 20433651 ~ 20434637 (-)
G1047305 NA non-coding upstream 377719 20464687 ~ 20464906 (-)
G1047308 NA non-coding upstream 381740 20468708 ~ 20469590 (-)
LOC110537144 LOC106568168 other downstream 503845 19550953 ~ 19569458 (-)
LOC110537130 LOC106568157 other downstream 1157408 18833119 ~ 18907377 (-)
G1045201 NA other downstream 1247120 18813902 ~ 18815394 (-)
LOC110537121 LOC106568150 other downstream 1615263 18439759 ~ 18458056 (-)
G1047325 NA other upstream 408597 20495565 ~ 20496428 (-)
G1047473 NA other upstream 614572 20701540 ~ 20702040 (-)
LOC110537162 LOC106568189 other upstream 775624 20862558 ~ 20888980 (-)
LOC110537166 srsf9 other upstream 846993 20933954 ~ 20938307 (-)

Expression


Co-expression Network