Gene
RNA
| Item | Value |
|---|---|
| gene id | G1046793 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 20247038 ~ 20279081 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1192967 | False | 305 | lncRNA | 0.42 | 3 | 20247038 | 20279081 |
| TU1192966 | True | 319 | lncRNA | 0.41 | 2 | 20278730 | 20279081 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118937812 | NA | coding | upstream | 220869 | 20021037 ~ 20026169 (+) |
| LOC110537152 | LOC106568180 | coding | upstream | 354458 | 19872474 ~ 19892580 (+) |
| LOC110537151 | LOC106568178 | coding | upstream | 377847 | 19866332 ~ 19869191 (+) |
| LOC110536813 | LOC106568177 | coding | upstream | 394743 | 19847408 ~ 19852295 (+) |
| LOC110537150 | LOC106568245 | coding | upstream | 426030 | 19790016 ~ 19821008 (+) |
| LOC110537158 | LOC106568186 | coding | downstream | 388876 | 20667957 ~ 20694090 (+) |
| LOC118937641 | NA | coding | downstream | 517033 | 20796080 ~ 20801052 (+) |
| LOC110537160 | LOC106564165 | coding | downstream | 524944 | 20804025 ~ 20846262 (+) |
| LOC110537163 | LOC106568190 | coding | downstream | 612907 | 20891988 ~ 20912792 (+) |
| LOC110537167 | LOC106568193 | coding | downstream | 653455 | 20932536 ~ 20933866 (+) |
| G1046754 | NA | non-coding | upstream | 44764 | 20197306 ~ 20202274 (+) |
| G1046714 | NA | non-coding | upstream | 120411 | 20125530 ~ 20126627 (+) |
| G1046637 | NA | non-coding | upstream | 231029 | 20015604 ~ 20016009 (+) |
| G1046632 | NA | non-coding | upstream | 233317 | 20013494 ~ 20013721 (+) |
| G1046616 | NA | non-coding | upstream | 251452 | 19995383 ~ 19995586 (+) |
| G1046849 | NA | non-coding | downstream | 56027 | 20335108 ~ 20335635 (+) |
| G1046897 | NA | non-coding | downstream | 136018 | 20415099 ~ 20415340 (+) |
| G1046928 | NA | non-coding | downstream | 188766 | 20467847 ~ 20501103 (+) |
| G1046927 | NA | non-coding | downstream | 209165 | 20488246 ~ 20489674 (+) |
| G1046929 | NA | non-coding | downstream | 230188 | 20509269 ~ 20511519 (+) |
| G1046724 | NA | other | upstream | 99624 | 20144179 ~ 20147414 (+) |
| G1045418 | NA | other | upstream | 1281096 | 18965568 ~ 18965942 (+) |
| G1044317 | NA | other | upstream | 1853697 | 18392646 ~ 18393341 (+) |
| G1044265 | NA | other | upstream | 1950636 | 18295930 ~ 18296402 (+) |
| G1044201 | NA | other | upstream | 2169738 | 18075802 ~ 18077300 (+) |
| G1046823 | NA | other | downstream | 3805 | 20282886 ~ 20293851 (+) |
| G1048417 | LOC106568221 | other | downstream | 1554013 | 21833094 ~ 21834812 (+) |
| G1049502 | NA | other | downstream | 2246860 | 22525941 ~ 22526232 (+) |
