G1046849


Basic Information

Item Value
gene id G1046849
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 20335108 ~ 20335635 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1193031
ctttactctctctttcactgtctttactctctctttcacagtctttactcactctttcactttctttactctctcctccattgtctttactctctctttcactgtctttactcactctttcactggctttactctctctttcactgtctttactctctctttcacagtcGTTACTCTCTCTTTCAATGTCTTTACTcactctttcactgtctttactctctctttcactgtctttactctctctttcacagtctttactcactctttcactttctttactctctcctccattgtctttactctctctttcactgtctttactcactctttcactgtctttactcactctttcactggctttactctctctttcactgtctttactctctcctccactgtctttactctctctttcactgtctttactctctctttcactgctctctctctctgtctctctcctctcctccactgtctttctccctctctgtctctctctcacacccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1193031 True 507 lncRNA 0.41 2 20335108 20335635

Neighbor

gene id symbol gene type direction distance location
LOC118937812 NA coding upstream 308939 20021037 ~ 20026169 (+)
LOC110537152 LOC106568180 coding upstream 442528 19872474 ~ 19892580 (+)
LOC110537151 LOC106568178 coding upstream 465917 19866332 ~ 19869191 (+)
LOC110536813 LOC106568177 coding upstream 482813 19847408 ~ 19852295 (+)
LOC110537150 LOC106568245 coding upstream 514100 19790016 ~ 19821008 (+)
LOC110537158 LOC106568186 coding downstream 332322 20667957 ~ 20694090 (+)
LOC118937641 NA coding downstream 460479 20796080 ~ 20801052 (+)
LOC110537160 LOC106564165 coding downstream 468390 20804025 ~ 20846262 (+)
LOC110537163 LOC106568190 coding downstream 556353 20891988 ~ 20912792 (+)
LOC110537167 LOC106568193 coding downstream 596901 20932536 ~ 20933866 (+)
G1046793 NA non-coding upstream 56027 20247038 ~ 20279081 (+)
G1046754 NA non-coding upstream 132834 20197306 ~ 20202274 (+)
G1046714 NA non-coding upstream 208481 20125530 ~ 20126627 (+)
G1046637 NA non-coding upstream 319099 20015604 ~ 20016009 (+)
G1046632 NA non-coding upstream 321387 20013494 ~ 20013721 (+)
G1046897 NA non-coding downstream 79464 20415099 ~ 20415340 (+)
G1046928 NA non-coding downstream 132212 20467847 ~ 20501103 (+)
G1046927 NA non-coding downstream 152611 20488246 ~ 20489674 (+)
G1046929 NA non-coding downstream 173634 20509269 ~ 20511519 (+)
G1046953 NA non-coding downstream 187233 20522868 ~ 20524210 (+)
G1046823 NA other upstream 41257 20282886 ~ 20293851 (+)
G1046724 NA other upstream 187694 20144179 ~ 20147414 (+)
G1045418 NA other upstream 1369166 18965568 ~ 18965942 (+)
G1044317 NA other upstream 1941767 18392646 ~ 18393341 (+)
G1044265 NA other upstream 2038706 18295930 ~ 18296402 (+)
G1048417 LOC106568221 other downstream 1497459 21833094 ~ 21834812 (+)
G1049502 NA other downstream 2190306 22525941 ~ 22526232 (+)
G1049629 LOC106456187 other downstream 2393295 22728930 ~ 22737666 (+)

Expression


Co-expression Network