G1046953


Basic Information

Item Value
gene id G1046953
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 20522868 ~ 20524210 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1193153
CTTCATAGATGAgaggacaagacacagagaccCTATCTAACTTCATAGATGAGAGGACAAGACACAGAGGCCCTATCTAACTTCATAGATGAGAGGACAAGACACAGAGGCCCTATCTAACTTCATAGATGAGAGGACAAGACACAGAGGTCCTATCTAACTTCATAGATGAGAGGACAAGACACAGAGGCCTAGTCTACCTCAGTAAAGTATAAGCCAactgacagagacacacatatTTGGTCCCATTGCTGCCGATTACTCCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1193153 True 267 lncRNA 0.45 2 20522868 20524210

Neighbor

gene id symbol gene type direction distance location
LOC110537154 LOC106568183 coding upstream 152325 20107346 ~ 20370543 (+)
LOC118937812 NA coding upstream 496699 20021037 ~ 20026169 (+)
LOC110537152 LOC106568180 coding upstream 630288 19872474 ~ 19892580 (+)
LOC110537151 LOC106568178 coding upstream 653677 19866332 ~ 19869191 (+)
LOC110536813 LOC106568177 coding upstream 670573 19847408 ~ 19852295 (+)
LOC110537158 LOC106568186 coding downstream 143747 20667957 ~ 20694090 (+)
LOC118937641 NA coding downstream 271904 20796080 ~ 20801052 (+)
LOC110537160 LOC106564165 coding downstream 279815 20804025 ~ 20846262 (+)
LOC110537163 LOC106568190 coding downstream 367778 20891988 ~ 20912792 (+)
LOC110537167 LOC106568193 coding downstream 408326 20932536 ~ 20933866 (+)
G1046929 NA non-coding upstream 11349 20509269 ~ 20511519 (+)
G1046928 NA non-coding upstream 21765 20467847 ~ 20501103 (+)
G1046927 NA non-coding upstream 33194 20488246 ~ 20489674 (+)
G1046897 NA non-coding upstream 107528 20415099 ~ 20415340 (+)
G1046849 NA non-coding upstream 187233 20335108 ~ 20335635 (+)
G1046955 NA non-coding downstream 841 20525051 ~ 20527466 (+)
G1046972 NA non-coding downstream 30360 20554570 ~ 20556899 (+)
G1047400 NA non-coding downstream 146841 20671051 ~ 20671269 (+)
G1047407 NA non-coding downstream 161643 20685853 ~ 20686274 (+)
G1047408 NA non-coding downstream 162513 20686723 ~ 20687668 (+)
G1046823 NA other upstream 229017 20282886 ~ 20293851 (+)
G1046724 NA other upstream 375454 20144179 ~ 20147414 (+)
G1045418 NA other upstream 1556926 18965568 ~ 18965942 (+)
G1044317 NA other upstream 2129527 18392646 ~ 18393341 (+)
G1048417 LOC106568221 other downstream 1308884 21833094 ~ 21834812 (+)
G1049502 NA other downstream 2001731 22525941 ~ 22526232 (+)
G1049629 LOC106456187 other downstream 2204720 22728930 ~ 22737666 (+)
G1051534 NA other downstream 3653220 24177430 ~ 24177934 (+)

Expression


Co-expression Network