Gene
RNA
| Item | Value |
|---|---|
| gene id | G1047412 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 20670949 ~ 20671173 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1193658 | True | 225 | lncRNA | 0.38 | 1 | 20670949 | 20671173 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537157 | LOC101448024 | coding | downstream | 32268 | 20607973 ~ 20638681 (-) |
| LOC110537156 | LOC106568185 | coding | downstream | 71473 | 20488123 ~ 20599476 (-) |
| LOC110536815 | LOC106568184 | coding | downstream | 183400 | 20374335 ~ 20487549 (-) |
| LOC110537153 | LOC106568182 | coding | downstream | 692269 | 19941506 ~ 19978680 (-) |
| LOC110536814 | LOC106568181 | coding | downstream | 732365 | 19893417 ~ 19938584 (-) |
| LOC110537159 | LOC106568248 | coding | upstream | 118682 | 20789855 ~ 20797912 (-) |
| gltp | LOC106568188 | coding | upstream | 183653 | 20854826 ~ 20857785 (-) |
| LOC110537162 | LOC106568189 | coding | upstream | 191385 | 20862558 ~ 20888980 (-) |
| LOC118937642 | NA | coding | upstream | 239521 | 20910694 ~ 20912332 (-) |
| LOC110537166 | srsf9 | coding | upstream | 262781 | 20933954 ~ 20938307 (-) |
| G1047411 | NA | non-coding | downstream | 100 | 20670650 ~ 20670849 (-) |
| G1047410 | NA | non-coding | downstream | 2067 | 20667484 ~ 20668882 (-) |
| G1047387 | NA | non-coding | downstream | 10343 | 20660390 ~ 20660606 (-) |
| G1047376 | NA | non-coding | downstream | 21659 | 20648957 ~ 20649290 (-) |
| G1047368 | NA | non-coding | downstream | 33548 | 20637143 ~ 20637401 (-) |
| G1047414 | NA | non-coding | upstream | 2383 | 20673556 ~ 20678518 (-) |
| G1047419 | NA | non-coding | upstream | 17698 | 20688871 ~ 20689128 (-) |
| G1047421 | gdnf | non-coding | upstream | 19303 | 20690476 ~ 20691901 (-) |
| G1047422 | NA | non-coding | upstream | 20830 | 20692003 ~ 20694015 (-) |
| G1047472 | NA | non-coding | upstream | 23048 | 20694221 ~ 20695538 (-) |
| G1047325 | NA | other | downstream | 174521 | 20495565 ~ 20496428 (-) |
| LOC110537144 | LOC106568168 | other | downstream | 1112280 | 19550953 ~ 19569458 (-) |
| LOC110537130 | LOC106568157 | other | downstream | 1765843 | 18833119 ~ 18907377 (-) |
| G1047473 | NA | other | upstream | 30367 | 20701540 ~ 20702040 (-) |
| G1048931 | NA | other | upstream | 1114018 | 21785191 ~ 21785557 (-) |
| G1048983 | NA | other | upstream | 1218365 | 21889538 ~ 21889869 (-) |
