Gene
RNA
| Item | Value |
|---|---|
| gene id | G1047407 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 20685853 ~ 20686274 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1193653 | True | 422 | lncRNA | 0.47 | 1 | 20685853 | 20686274 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537154 | LOC106568183 | coding | upstream | 315310 | 20107346 ~ 20370543 (+) |
| LOC118937812 | NA | coding | upstream | 659684 | 20021037 ~ 20026169 (+) |
| LOC110537152 | LOC106568180 | coding | upstream | 793273 | 19872474 ~ 19892580 (+) |
| LOC110537151 | LOC106568178 | coding | upstream | 816662 | 19866332 ~ 19869191 (+) |
| LOC110536813 | LOC106568177 | coding | upstream | 833558 | 19847408 ~ 19852295 (+) |
| LOC118937641 | NA | coding | downstream | 109840 | 20796080 ~ 20801052 (+) |
| LOC110537160 | LOC106564165 | coding | downstream | 117751 | 20804025 ~ 20846262 (+) |
| LOC110537163 | LOC106568190 | coding | downstream | 205714 | 20891988 ~ 20912792 (+) |
| LOC110537167 | LOC106568193 | coding | downstream | 246262 | 20932536 ~ 20933866 (+) |
| LOC110537168 | LOC106568260 | coding | downstream | 275229 | 20961503 ~ 20964467 (+) |
| G1047400 | NA | non-coding | upstream | 14584 | 20671051 ~ 20671269 (+) |
| G1046972 | NA | non-coding | upstream | 128954 | 20554570 ~ 20556899 (+) |
| G1046955 | NA | non-coding | upstream | 158387 | 20525051 ~ 20527466 (+) |
| G1046953 | NA | non-coding | upstream | 161643 | 20522868 ~ 20524210 (+) |
| G1046929 | NA | non-coding | upstream | 174334 | 20509269 ~ 20511519 (+) |
| G1047408 | NA | non-coding | downstream | 449 | 20686723 ~ 20687668 (+) |
| G1047409 | NA | non-coding | downstream | 3978 | 20690252 ~ 20690481 (+) |
| LOC110537158 | LOC106568186 | non-coding | downstream | 5813 | 20667957 ~ 20694090 (+) |
| G1047425 | NA | non-coding | downstream | 12780 | 20699054 ~ 20699289 (+) |
| G1047427 | NA | non-coding | downstream | 15464 | 20701738 ~ 20702040 (+) |
| G1046823 | NA | other | upstream | 392002 | 20282886 ~ 20293851 (+) |
| G1046724 | NA | other | upstream | 538439 | 20144179 ~ 20147414 (+) |
| G1045418 | NA | other | upstream | 1719911 | 18965568 ~ 18965942 (+) |
| G1044317 | NA | other | upstream | 2292512 | 18392646 ~ 18393341 (+) |
| G1048417 | LOC106568221 | other | downstream | 1146820 | 21833094 ~ 21834812 (+) |
| G1049502 | NA | other | downstream | 1839667 | 22525941 ~ 22526232 (+) |
| G1049629 | LOC106456187 | other | downstream | 2042656 | 22728930 ~ 22737666 (+) |
| G1051534 | NA | other | downstream | 3491156 | 24177430 ~ 24177934 (+) |
