G1047427


Basic Information

Item Value
gene id G1047427
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 20701738 ~ 20702040 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1193676
agcatacaggtcgcagtggtgggtagtatatggggctttggtgataaaacggatggcactgtgatagactacatccagtttgctgagtagagtgttgggggctattttgtaaatgacatcaccgaagtcaaggatcggtaggatagtcagttttacgagggtatgtttggtggcatgagtgaaggaggctttgtttgttctagatttcattttggattgtatacacttaatgtgagtctggaaggagattttacagtctaaccagacacttaggtatttgtagttgtccacatagtcTTGGTC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1193676 True 303 lncRNA 0.43 1 20701738 20702040

Neighbor

gene id symbol gene type direction distance location
LOC110537158 LOC106568186 coding upstream 7777 20667957 ~ 20694090 (+)
LOC110537154 LOC106568183 coding upstream 331195 20107346 ~ 20370543 (+)
LOC118937812 NA coding upstream 675569 20021037 ~ 20026169 (+)
LOC110537152 LOC106568180 coding upstream 809158 19872474 ~ 19892580 (+)
LOC110537151 LOC106568178 coding upstream 832547 19866332 ~ 19869191 (+)
LOC118937641 NA coding downstream 94074 20796080 ~ 20801052 (+)
LOC110537160 LOC106564165 coding downstream 101985 20804025 ~ 20846262 (+)
LOC110537163 LOC106568190 coding downstream 189948 20891988 ~ 20912792 (+)
LOC110537167 LOC106568193 coding downstream 230496 20932536 ~ 20933866 (+)
LOC110537168 LOC106568260 coding downstream 259463 20961503 ~ 20964467 (+)
G1047425 NA non-coding upstream 2449 20699054 ~ 20699289 (+)
G1047409 NA non-coding upstream 11257 20690252 ~ 20690481 (+)
G1047408 NA non-coding upstream 14070 20686723 ~ 20687668 (+)
G1047407 NA non-coding upstream 15464 20685853 ~ 20686274 (+)
G1047432 NA non-coding downstream 5546 20707586 ~ 20707807 (+)
G1047443 NA non-coding downstream 21321 20723361 ~ 20723596 (+)
G1047447 NA non-coding downstream 28356 20730396 ~ 20730679 (+)
G1047519 NA non-coding downstream 75933 20777973 ~ 20778221 (+)
G1047535 NA non-coding downstream 87853 20789893 ~ 20790534 (+)
G1046929 NA other upstream 190219 20509269 ~ 20511519 (+)
G1046823 NA other upstream 407887 20282886 ~ 20293851 (+)
G1046724 NA other upstream 554324 20144179 ~ 20147414 (+)
G1045418 NA other upstream 1735796 18965568 ~ 18965942 (+)
G1048417 LOC106568221 other downstream 1131054 21833094 ~ 21834812 (+)
G1049502 NA other downstream 1823901 22525941 ~ 22526232 (+)
G1049629 LOC106456187 other downstream 2026890 22728930 ~ 22737666 (+)
G1051534 NA other downstream 3475390 24177430 ~ 24177934 (+)
LOC110537258 msi2h other downstream 4650544 25352530 ~ 25719607 (+)

Expression


Co-expression Network