G1047432



Basic Information


Item Value
gene id G1047432
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 20707586 ~ 20707807 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1193681
tgtccttgttctgtgtgtatgtgcaccagtattaggctgtttggtgttgggttatgtgggtccttagtgtcgtgatgtccttgttctgtgtgtatgtgcaccagtattaggctgtttggtgttgggttatgtgggtccttagtgtcgtgatgtccttgttctgtgtgtatgtgcaccagtattaggctgtttggtgttgggttatgtgggtccttagtgtct

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1193681 True 222 lncRNA 0.46 1 20707586 20707807

Neighbor


gene id symbol gene type direction distance location
LOC110537158 LOC106568186 coding upstream 13625 20667957 ~ 20694090 (+)
LOC110537154 LOC106568183 coding upstream 337043 20107346 ~ 20370543 (+)
LOC118937812 NA coding upstream 681417 20021037 ~ 20026169 (+)
LOC110537152 LOC106568180 coding upstream 815006 19872474 ~ 19892580 (+)
LOC110537151 LOC106568178 coding upstream 838395 19866332 ~ 19869191 (+)
LOC118937641 NA coding downstream 88307 20796080 ~ 20801052 (+)
LOC110537160 LOC106564165 coding downstream 96218 20804025 ~ 20846262 (+)
LOC110537163 LOC106568190 coding downstream 184181 20891988 ~ 20912792 (+)
LOC110537167 LOC106568193 coding downstream 224729 20932536 ~ 20933866 (+)
LOC110537168 LOC106568260 coding downstream 253696 20961503 ~ 20964467 (+)
G1047427 NA non-coding upstream 5546 20701738 ~ 20702040 (+)
G1047425 NA non-coding upstream 8297 20699054 ~ 20699289 (+)
G1047409 NA non-coding upstream 17105 20690252 ~ 20690481 (+)
G1047408 NA non-coding upstream 19918 20686723 ~ 20687668 (+)
G1047443 NA non-coding downstream 15554 20723361 ~ 20723596 (+)
G1047447 NA non-coding downstream 22589 20730396 ~ 20730679 (+)
G1047519 NA non-coding downstream 70166 20777973 ~ 20778221 (+)
G1047535 NA non-coding downstream 82086 20789893 ~ 20790534 (+)
G1047538 NA non-coding downstream 84836 20792643 ~ 20792911 (+)
G1046929 NA other upstream 196067 20509269 ~ 20511519 (+)
G1046823 NA other upstream 413735 20282886 ~ 20293851 (+)
G1046724 NA other upstream 560172 20144179 ~ 20147414 (+)
G1045418 NA other upstream 1741644 18965568 ~ 18965942 (+)
G1048417 LOC106568221 other downstream 1125287 21833094 ~ 21834812 (+)
G1049502 NA other downstream 1818134 22525941 ~ 22526232 (+)
G1049629 LOC106456187 other downstream 2021123 22728930 ~ 22737666 (+)
G1051534 NA other downstream 3469623 24177430 ~ 24177934 (+)
LOC110537258 msi2h other downstream 4644777 25352530 ~ 25719607 (+)

Expression



Co-expression Network