G1047519


Basic Information

Item Value
gene id G1047519
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 20777973 ~ 20778221 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1193770
TTTTACAACTTTATAAttctacttcactacattcttaaagaaaatgatgtatttttcactccatacattttccttgacacccaaaagtactcgttacattttgaatacttagcaggacaggaaaattgtgtcattcacacttatcaagagaacatccctggtcatccctactgcctctgatctggcatactcactaaacacatgctttgtgtGTAAACTATGTCTGagggttggagtgtgcccctggct

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1193770 True 249 lncRNA 0.38 1 20777973 20778221

Neighbor

gene id symbol gene type direction distance location
LOC110537158 LOC106568186 coding upstream 84012 20667957 ~ 20694090 (+)
LOC110537154 LOC106568183 coding upstream 407430 20107346 ~ 20370543 (+)
LOC118937812 NA coding upstream 751804 20021037 ~ 20026169 (+)
LOC110537152 LOC106568180 coding upstream 885393 19872474 ~ 19892580 (+)
LOC110537151 LOC106568178 coding upstream 908782 19866332 ~ 19869191 (+)
LOC118937641 NA coding downstream 17893 20796080 ~ 20801052 (+)
LOC110537160 LOC106564165 coding downstream 25804 20804025 ~ 20846262 (+)
LOC110537163 LOC106568190 coding downstream 113767 20891988 ~ 20912792 (+)
LOC110537167 LOC106568193 coding downstream 154315 20932536 ~ 20933866 (+)
LOC110537168 LOC106568260 coding downstream 183282 20961503 ~ 20964467 (+)
G1047447 NA non-coding upstream 47294 20730396 ~ 20730679 (+)
G1047443 NA non-coding upstream 54377 20723361 ~ 20723596 (+)
G1047432 NA non-coding upstream 70166 20707586 ~ 20707807 (+)
G1047427 NA non-coding upstream 75933 20701738 ~ 20702040 (+)
G1047425 NA non-coding upstream 78684 20699054 ~ 20699289 (+)
G1047535 NA non-coding downstream 11672 20789893 ~ 20790534 (+)
G1047538 NA non-coding downstream 14422 20792643 ~ 20792911 (+)
G1047539 LOC106568248 non-coding downstream 14862 20793083 ~ 20793930 (+)
G1047540 NA non-coding downstream 15861 20794082 ~ 20794349 (+)
G1046929 NA other upstream 266454 20509269 ~ 20511519 (+)
G1046823 NA other upstream 484122 20282886 ~ 20293851 (+)
G1046724 NA other upstream 630559 20144179 ~ 20147414 (+)
G1045418 NA other upstream 1812031 18965568 ~ 18965942 (+)
G1048417 LOC106568221 other downstream 1054873 21833094 ~ 21834812 (+)
G1049502 NA other downstream 1747720 22525941 ~ 22526232 (+)
G1049629 LOC106456187 other downstream 1950709 22728930 ~ 22737666 (+)
G1051534 NA other downstream 3399209 24177430 ~ 24177934 (+)
LOC110537258 msi2h other downstream 4574363 25352530 ~ 25719607 (+)

Expression


Co-expression Network