Gene
RNA
| Item | Value |
|---|---|
| gene id | G1047646 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 20804058 ~ 20830715 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| protein FAM222A-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1193913 | True | 504 | lncRNA | 0.50 | 2 | 20804058 | 20830715 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537159 | LOC106568248 | coding | downstream | 6146 | 20789855 ~ 20797912 (-) |
| LOC110537157 | LOC101448024 | coding | downstream | 165377 | 20607973 ~ 20638681 (-) |
| LOC110537156 | LOC106568185 | coding | downstream | 204582 | 20488123 ~ 20599476 (-) |
| LOC110536815 | LOC106568184 | coding | downstream | 316509 | 20374335 ~ 20487549 (-) |
| LOC110537153 | LOC106568182 | coding | downstream | 825378 | 19941506 ~ 19978680 (-) |
| gltp | LOC106568188 | coding | upstream | 24111 | 20854826 ~ 20857785 (-) |
| LOC110537162 | LOC106568189 | coding | upstream | 31843 | 20862558 ~ 20888980 (-) |
| LOC118937642 | NA | coding | upstream | 79979 | 20910694 ~ 20912332 (-) |
| LOC110537166 | srsf9 | coding | upstream | 103239 | 20933954 ~ 20938307 (-) |
| LOC110537169 | LOC106568195 | coding | upstream | 333884 | 21164599 ~ 21212157 (-) |
| G1047534 | NA | non-coding | downstream | 14532 | 20789274 ~ 20789526 (-) |
| G1047527 | NA | non-coding | downstream | 21251 | 20782603 ~ 20782807 (-) |
| G1047524 | NA | non-coding | downstream | 22308 | 20781512 ~ 20781750 (-) |
| G1047520 | NA | non-coding | downstream | 25842 | 20777904 ~ 20778216 (-) |
| G1047758 | NA | non-coding | upstream | 161599 | 20992314 ~ 20992528 (-) |
| G1047768 | NA | non-coding | upstream | 167614 | 20998329 ~ 20998830 (-) |
| G1047775 | NA | non-coding | upstream | 174739 | 21005454 ~ 21005676 (-) |
| G1047896 | NA | non-coding | upstream | 223183 | 21053898 ~ 21054693 (-) |
| G1047961 | NA | non-coding | upstream | 296515 | 21127230 ~ 21127558 (-) |
| G1047473 | NA | other | downstream | 102018 | 20701540 ~ 20702040 (-) |
| G1047325 | NA | other | downstream | 307630 | 20495565 ~ 20496428 (-) |
| LOC110536814 | LOC106568181 | other | downstream | 865553 | 19893417 ~ 19938584 (-) |
| LOC110537144 | LOC106568168 | other | downstream | 1245389 | 19550953 ~ 19569458 (-) |
| G1048931 | NA | other | upstream | 954476 | 21785191 ~ 21785557 (-) |
| G1048983 | NA | other | upstream | 1058823 | 21889538 ~ 21889869 (-) |
| G1049013 | LOC106568226 | other | upstream | 1100468 | 21931183 ~ 21931785 (-) |
