G1047757


Basic Information

Item Value
gene id G1047757
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 20992157 ~ 20992457 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1194054
tatgaaatcatgttgtaaccaaaaaagtgttaaacaaatccaaatatccAAATatataagtagccaccctttgcctggatgacagctttgcacactcttcgcattctctcaaccagcttcgcctggaatgcttttcaaacagtcttgaaggagttcccatatatgctgagcacttgttggctgcttttccttgactctgcggtccaactcatcccaaaccatctcaattggtttgaggtcaggtgattgtggaggccaggtcatctgatgcagcactacatcactctccttcttggtcaaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1194054 True 301 lncRNA 0.44 1 20992157 20992457

Neighbor

gene id symbol gene type direction distance location
LOC110537168 LOC106568260 coding upstream 27690 20961503 ~ 20964467 (+)
LOC110537167 LOC106568193 coding upstream 58291 20932536 ~ 20933866 (+)
LOC110537163 LOC106568190 coding upstream 79365 20891988 ~ 20912792 (+)
LOC110537160 LOC106564165 coding upstream 145895 20804025 ~ 20846262 (+)
LOC118937641 NA coding upstream 191105 20796080 ~ 20801052 (+)
LOC110537171 LOC106568197 coding downstream 296627 21289084 ~ 21298403 (+)
LOC110537175 LOC106568200 coding downstream 472090 21464547 ~ 21481116 (+)
LOC110536816 myhz2 coding downstream 518032 21510489 ~ 21516816 (+)
LOC110537179 LOC106568202 coding downstream 606308 21598765 ~ 21626234 (+)
foxred1 foxred1 coding downstream 635840 21628297 ~ 21643733 (+)
G1047744 NA non-coding upstream 10236 20981435 ~ 20981921 (+)
G1047583 NA non-coding upstream 120406 20858817 ~ 20871751 (+)
G1047565 NA non-coding upstream 164659 20827040 ~ 20827498 (+)
G1047763 NA non-coding downstream 4265 20996722 ~ 20996996 (+)
G1047766 NA non-coding downstream 6006 20998463 ~ 20998750 (+)
G1047776 NA non-coding downstream 14079 21006536 ~ 21006888 (+)
G1047803 NA non-coding downstream 29803 21022260 ~ 21024124 (+)
G1047816 NA non-coding downstream 36287 21028744 ~ 21029015 (+)
LOC110537158 LOC106568186 other upstream 300415 20667957 ~ 20694090 (+)
G1046929 NA other upstream 480638 20509269 ~ 20511519 (+)
G1046823 NA other upstream 698306 20282886 ~ 20293851 (+)
G1046724 NA other upstream 844743 20144179 ~ 20147414 (+)
G1045418 NA other upstream 2026215 18965568 ~ 18965942 (+)
G1048417 LOC106568221 other downstream 840637 21833094 ~ 21834812 (+)
G1049502 NA other downstream 1533484 22525941 ~ 22526232 (+)
G1049629 LOC106456187 other downstream 1736473 22728930 ~ 22737666 (+)
G1051534 NA other downstream 3184973 24177430 ~ 24177934 (+)
LOC110537258 msi2h other downstream 4360127 25352530 ~ 25719607 (+)

Expression


Co-expression Network