Gene
RNA
| Item | Value |
|---|---|
| gene id | G1047766 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 20998463 ~ 20998750 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1194063 | True | 288 | lncRNA | 0.41 | 1 | 20998463 | 20998750 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537168 | LOC106568260 | coding | upstream | 33996 | 20961503 ~ 20964467 (+) |
| LOC110537167 | LOC106568193 | coding | upstream | 64597 | 20932536 ~ 20933866 (+) |
| LOC110537163 | LOC106568190 | coding | upstream | 85671 | 20891988 ~ 20912792 (+) |
| LOC110537160 | LOC106564165 | coding | upstream | 152201 | 20804025 ~ 20846262 (+) |
| LOC118937641 | NA | coding | upstream | 197411 | 20796080 ~ 20801052 (+) |
| LOC110537171 | LOC106568197 | coding | downstream | 290334 | 21289084 ~ 21298403 (+) |
| LOC110537175 | LOC106568200 | coding | downstream | 465797 | 21464547 ~ 21481116 (+) |
| LOC110536816 | myhz2 | coding | downstream | 511739 | 21510489 ~ 21516816 (+) |
| LOC110537179 | LOC106568202 | coding | downstream | 600015 | 21598765 ~ 21626234 (+) |
| foxred1 | foxred1 | coding | downstream | 629547 | 21628297 ~ 21643733 (+) |
| G1047763 | NA | non-coding | upstream | 1467 | 20996722 ~ 20996996 (+) |
| G1047757 | NA | non-coding | upstream | 6006 | 20992157 ~ 20992457 (+) |
| G1047744 | NA | non-coding | upstream | 16542 | 20981435 ~ 20981921 (+) |
| G1047583 | NA | non-coding | upstream | 126712 | 20858817 ~ 20871751 (+) |
| G1047776 | NA | non-coding | downstream | 7786 | 21006536 ~ 21006888 (+) |
| G1047803 | NA | non-coding | downstream | 23510 | 21022260 ~ 21024124 (+) |
| G1047816 | NA | non-coding | downstream | 29994 | 21028744 ~ 21029015 (+) |
| G1047952 | NA | non-coding | downstream | 124828 | 21123578 ~ 21123782 (+) |
| G1048070 | NA | non-coding | downstream | 218763 | 21217513 ~ 21258288 (+) |
| LOC110537158 | LOC106568186 | other | upstream | 306721 | 20667957 ~ 20694090 (+) |
| G1046929 | NA | other | upstream | 486944 | 20509269 ~ 20511519 (+) |
| G1046823 | NA | other | upstream | 704612 | 20282886 ~ 20293851 (+) |
| G1046724 | NA | other | upstream | 851049 | 20144179 ~ 20147414 (+) |
| G1045418 | NA | other | upstream | 2032521 | 18965568 ~ 18965942 (+) |
| G1048417 | LOC106568221 | other | downstream | 834344 | 21833094 ~ 21834812 (+) |
| G1049502 | NA | other | downstream | 1527191 | 22525941 ~ 22526232 (+) |
| G1049629 | LOC106456187 | other | downstream | 1730180 | 22728930 ~ 22737666 (+) |
| G1051534 | NA | other | downstream | 3178680 | 24177430 ~ 24177934 (+) |
| LOC110537258 | msi2h | other | downstream | 4353834 | 25352530 ~ 25719607 (+) |
