G1047776


Basic Information

Item Value
gene id G1047776
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 21006536 ~ 21006888 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1194073
ACAATGCTCTGAGGCACTGTGAGGTCACCTGCAGCTAGCGGTGATGGTGACGCTTTGGGTGCAGCTGGTGGGAGTTGAACCACCGTTGAAGAGGCCGGAGATGGAGCAGGCCCAGGGGAATCAACAACGAGGCTGCCATCAGCAGCAAGCCAAACAGCCGAACAGGCGGATACCACCTGCCCCTGACGAAAGTAGTCGAGGCAAGATAAGATCACCTGAACCCTTCTGGTGGGCAGGtgtgctctcatgaggactgagtCCAGTTCCATACCAATGAAGGCCACTCTCTGGGTGGGCTTCAGATGACTCCTGATGTTTACAGTAATGCCCAGCCCACCGTTGTGGGTCAGGAG

Function

NR:

description
PREDICTED: uncharacterized protein LOC107376163

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1194073 True 353 lncRNA 0.57 1 21006536 21006888

Neighbor

gene id symbol gene type direction distance location
LOC110537168 LOC106568260 coding upstream 42069 20961503 ~ 20964467 (+)
LOC110537167 LOC106568193 coding upstream 72670 20932536 ~ 20933866 (+)
LOC110537163 LOC106568190 coding upstream 93744 20891988 ~ 20912792 (+)
LOC110537160 LOC106564165 coding upstream 160274 20804025 ~ 20846262 (+)
LOC118937641 NA coding upstream 205484 20796080 ~ 20801052 (+)
LOC110537171 LOC106568197 coding downstream 282196 21289084 ~ 21298403 (+)
LOC110537175 LOC106568200 coding downstream 457659 21464547 ~ 21481116 (+)
LOC110536816 myhz2 coding downstream 503601 21510489 ~ 21516816 (+)
LOC110537179 LOC106568202 coding downstream 591877 21598765 ~ 21626234 (+)
foxred1 foxred1 coding downstream 621409 21628297 ~ 21643733 (+)
G1047766 NA non-coding upstream 7786 20998463 ~ 20998750 (+)
G1047763 NA non-coding upstream 9540 20996722 ~ 20996996 (+)
G1047757 NA non-coding upstream 14079 20992157 ~ 20992457 (+)
G1047744 NA non-coding upstream 24615 20981435 ~ 20981921 (+)
G1047803 NA non-coding downstream 15372 21022260 ~ 21024124 (+)
G1047816 NA non-coding downstream 21856 21028744 ~ 21029015 (+)
G1047952 NA non-coding downstream 116690 21123578 ~ 21123782 (+)
G1048070 NA non-coding downstream 210625 21217513 ~ 21258288 (+)
G1048104 NA non-coding downstream 262404 21269292 ~ 21269505 (+)
LOC110537158 LOC106568186 other upstream 314794 20667957 ~ 20694090 (+)
G1046929 NA other upstream 495017 20509269 ~ 20511519 (+)
G1046823 NA other upstream 712685 20282886 ~ 20293851 (+)
G1046724 NA other upstream 859122 20144179 ~ 20147414 (+)
G1045418 NA other upstream 2040594 18965568 ~ 18965942 (+)
G1048417 LOC106568221 other downstream 826206 21833094 ~ 21834812 (+)
G1049502 NA other downstream 1519053 22525941 ~ 22526232 (+)
G1049629 LOC106456187 other downstream 1722042 22728930 ~ 22737666 (+)
G1051534 NA other downstream 3170542 24177430 ~ 24177934 (+)
LOC110537258 msi2h other downstream 4345696 25352530 ~ 25719607 (+)

Expression


Co-expression Network