G1047896


Basic Information

Item Value
gene id G1047896
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 21053898 ~ 21054693 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1194202
GTAGAAGACATACAGTATttaagttgaatgcattcagttgtgtaattgactaggtatccccatccTTGTGTTACCAGTCCTCTGTAGCCCTCAGAGGTGAAAGAGAATGGTTTTCCATAAACATTGAAGCATCTCTGGGGCAGAGAAACTGTATTACTGAGTGGTGAGTAGAACAGTAAGTCTCCTCTATTATCCCACAATAGAGAGTAGTGAGTAGAACAGTAAGTCCTCTATTATCCCACAATAGAGAGTAGTGAGTAGAACAGTAAGTCCTCTATTATCCCACAATAGAGAGTAGTGAGTAGAACAGTAAGTCCTCTATTATCCCACAATAGAGAGTAGTGAGTAGAACAGTAAGTCCTCTATTATCCCACAATAGAGAGTAGTGAGTAGAACAGTAAGTCCTCTATTATCCCACAATAGAGAGTAGTGAGTAGAACAGTAAGTCCTCTACTATGCTACAATGCATACTGTTTGTAAAATCATCCAAATCACTTTTTAAAAAACAGTCTCTCCtgggctgcatttacacaggctgCCCAATTCTAATATTTTTTCCAATAACTTTTGACCAATTATGTCAGATGTTTTTCagagctgatgtgattggtcaaaagaccaattagtgggaaaaaacattggaattgggctgcctgtctaaagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1194202 True 664 lncRNA 0.39 2 21053898 21054693

Neighbor

gene id symbol gene type direction distance location
LOC110537166 srsf9 coding downstream 115591 20933954 ~ 20938307 (-)
LOC118937642 NA coding downstream 141566 20910694 ~ 20912332 (-)
LOC110537162 LOC106568189 coding downstream 164918 20862558 ~ 20888980 (-)
gltp LOC106568188 coding downstream 196113 20854826 ~ 20857785 (-)
LOC110537159 LOC106568248 coding downstream 255986 20789855 ~ 20797912 (-)
LOC110537169 LOC106568195 coding upstream 109906 21164599 ~ 21212157 (-)
LOC110539129 NA coding upstream 172327 21227020 ~ 21229340 (-)
LOC110537170 LOC106568196 coding upstream 219202 21273895 ~ 21288503 (-)
LOC110537172 NA coding upstream 257241 21311912 ~ 21312861 (-)
LOC110537173 LOC106568261 coding upstream 278352 21333045 ~ 21360455 (-)
G1047775 NA non-coding downstream 48222 21005454 ~ 21005676 (-)
G1047768 NA non-coding downstream 55068 20998329 ~ 20998830 (-)
G1047758 NA non-coding downstream 61370 20992314 ~ 20992528 (-)
G1047646 NA non-coding downstream 223183 20804058 ~ 20830715 (-)
G1047660 NA non-coding downstream 226295 20826469 ~ 20827603 (-)
G1047961 NA non-coding upstream 72537 21127230 ~ 21127558 (-)
G1048018 NA non-coding upstream 75460 21130153 ~ 21212558 (-)
G1048740 NA non-coding upstream 362631 21417324 ~ 21453977 (-)
G1048776 NA non-coding upstream 439022 21493715 ~ 21493950 (-)
G1047473 NA other downstream 351858 20701540 ~ 20702040 (-)
LOC110537156 LOC106568185 other downstream 454471 20488123 ~ 20599476 (-)
G1047325 NA other downstream 557470 20495565 ~ 20496428 (-)
G1048931 NA other upstream 730498 21785191 ~ 21785557 (-)
G1048983 NA other upstream 834845 21889538 ~ 21889869 (-)
G1049013 LOC106568226 other upstream 876490 21931183 ~ 21931785 (-)
G1048996 NA other upstream 882638 21937331 ~ 21938200 (-)
G1048995 NA other upstream 883753 21938446 ~ 21942996 (-)

Expression


Co-expression Network