Gene
RNA
| Item | Value |
|---|---|
| gene id | G1048104 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 21269292 ~ 21269505 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1194416 | True | 214 | lncRNA | 0.35 | 1 | 21269292 | 21269505 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537168 | LOC106568260 | coding | upstream | 304825 | 20961503 ~ 20964467 (+) |
| LOC110537167 | LOC106568193 | coding | upstream | 335426 | 20932536 ~ 20933866 (+) |
| LOC110537163 | LOC106568190 | coding | upstream | 356500 | 20891988 ~ 20912792 (+) |
| LOC110537160 | LOC106564165 | coding | upstream | 423030 | 20804025 ~ 20846262 (+) |
| LOC118937641 | NA | coding | upstream | 468240 | 20796080 ~ 20801052 (+) |
| LOC110537171 | LOC106568197 | coding | downstream | 19579 | 21289084 ~ 21298403 (+) |
| LOC110537175 | LOC106568200 | coding | downstream | 195042 | 21464547 ~ 21481116 (+) |
| LOC110536816 | myhz2 | coding | downstream | 240984 | 21510489 ~ 21516816 (+) |
| LOC110537179 | LOC106568202 | coding | downstream | 329260 | 21598765 ~ 21626234 (+) |
| foxred1 | foxred1 | coding | downstream | 358792 | 21628297 ~ 21643733 (+) |
| G1048070 | NA | non-coding | upstream | 11004 | 21217513 ~ 21258288 (+) |
| G1047952 | NA | non-coding | upstream | 145510 | 21123578 ~ 21123782 (+) |
| G1047816 | NA | non-coding | upstream | 240277 | 21028744 ~ 21029015 (+) |
| G1047803 | NA | non-coding | upstream | 245168 | 21022260 ~ 21024124 (+) |
| G1047776 | NA | non-coding | upstream | 262404 | 21006536 ~ 21006888 (+) |
| G1048109 | NA | non-coding | downstream | 5668 | 21275173 ~ 21312642 (+) |
| G1048086 | NA | non-coding | downstream | 56309 | 21325814 ~ 21330328 (+) |
| G1048194 | NA | non-coding | downstream | 131030 | 21400535 ~ 21409688 (+) |
| G1048237 | NA | non-coding | downstream | 213053 | 21482558 ~ 21482871 (+) |
| G1048250 | NA | non-coding | downstream | 219108 | 21488613 ~ 21488842 (+) |
| LOC110537158 | LOC106568186 | other | upstream | 577550 | 20667957 ~ 20694090 (+) |
| G1046929 | NA | other | upstream | 757773 | 20509269 ~ 20511519 (+) |
| G1046823 | NA | other | upstream | 975441 | 20282886 ~ 20293851 (+) |
| G1046724 | NA | other | upstream | 1121878 | 20144179 ~ 20147414 (+) |
| G1045418 | NA | other | upstream | 2303350 | 18965568 ~ 18965942 (+) |
| G1048417 | LOC106568221 | other | downstream | 563589 | 21833094 ~ 21834812 (+) |
| G1049502 | NA | other | downstream | 1256436 | 22525941 ~ 22526232 (+) |
| G1049629 | LOC106456187 | other | downstream | 1459425 | 22728930 ~ 22737666 (+) |
| G1051534 | NA | other | downstream | 2907925 | 24177430 ~ 24177934 (+) |
| LOC110537258 | msi2h | other | downstream | 4083079 | 25352530 ~ 25719607 (+) |
