G1048259


Basic Information

Item Value
gene id G1048259
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 21505083 ~ 21505359 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1194587
ttctaacataattgcaacagggttttctaatgatcaattagcctttttaaaacgattaacttggattagctaacacaacgtgccattggaacacaggagggatggttgctgatattgggcctctgtacgcctatgtagatattccataaagaaatcagctgtttccagctacaatagtcatttacaacattaacaatgtctacactgtatttctgatgaattgtatgttattttaatggacaacaaatgtgcttttctttcaaaaacaagtgacccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1194587 True 277 lncRNA 0.35 1 21505083 21505359

Neighbor

gene id symbol gene type direction distance location
LOC110537175 LOC106568200 coding upstream 23967 21464547 ~ 21481116 (+)
LOC110537171 LOC106568197 coding upstream 206680 21289084 ~ 21298403 (+)
LOC110537168 LOC106568260 coding upstream 540616 20961503 ~ 20964467 (+)
LOC110537167 LOC106568193 coding upstream 571217 20932536 ~ 20933866 (+)
LOC110537163 LOC106568190 coding upstream 592291 20891988 ~ 20912792 (+)
LOC110536816 myhz2 coding downstream 5130 21510489 ~ 21516816 (+)
LOC110537179 LOC106568202 coding downstream 93406 21598765 ~ 21626234 (+)
foxred1 foxred1 coding downstream 122938 21628297 ~ 21643733 (+)
LOC110537183 LOC105014907 coding downstream 150033 21655392 ~ 21666107 (+)
LOC110537185 LOC106568207 coding downstream 179999 21685358 ~ 21692839 (+)
G1048257 NA non-coding upstream 2427 21502252 ~ 21502656 (+)
G1048256 NA non-coding upstream 11318 21493536 ~ 21493765 (+)
G1048253 NA non-coding upstream 13063 21491807 ~ 21492020 (+)
G1048250 NA non-coding upstream 16241 21488613 ~ 21488842 (+)
G1048237 NA non-coding upstream 22212 21482558 ~ 21482871 (+)
G1048325 NA non-coding downstream 88756 21594115 ~ 21594427 (+)
G1048273 NA non-coding downstream 108887 21614246 ~ 21614728 (+)
G1048275 NA non-coding downstream 121269 21626628 ~ 21626969 (+)
G1048350 NA non-coding downstream 169183 21674542 ~ 21674800 (+)
G1048363 NA non-coding downstream 196759 21702118 ~ 21702698 (+)
LOC110537158 LOC106568186 other upstream 813341 20667957 ~ 20694090 (+)
G1046929 NA other upstream 993564 20509269 ~ 20511519 (+)
G1046823 NA other upstream 1211232 20282886 ~ 20293851 (+)
G1046724 NA other upstream 1357669 20144179 ~ 20147414 (+)
G1045418 NA other upstream 2539141 18965568 ~ 18965942 (+)
G1048417 LOC106568221 other downstream 327735 21833094 ~ 21834812 (+)
G1049502 NA other downstream 1020582 22525941 ~ 22526232 (+)
G1049629 LOC106456187 other downstream 1223571 22728930 ~ 22737666 (+)
G1051534 NA other downstream 2672071 24177430 ~ 24177934 (+)
LOC110537258 msi2h other downstream 3847225 25352530 ~ 25719607 (+)

Expression


Co-expression Network