G1048325


Basic Information

Item Value
gene id G1048325
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 21594115 ~ 21594427 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1194664
ggagattataacagaacatggccaagatgctcaaacgttcataaatgacctgcaaggtcagataataataatcacagtggttgtagagggtgcaacaggtcagcacctcaggagtaaatgtcagttggcttttcatagccgatcactcagagttagagacagcaggtgcggtagagagagggtgCAAAACAGCAGGttcgggacaaggtagcacgtccagtgaacaggtcagggttccatagccgcaggcagaacagttgaaactggagcagcagcatgaccaggtggactggggacaacaaggagtcatcag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1194664 True 313 lncRNA 0.50 1 21594115 21594427

Neighbor

gene id symbol gene type direction distance location
LOC110536816 myhz2 coding upstream 77299 21510489 ~ 21516816 (+)
LOC110537175 LOC106568200 coding upstream 112999 21464547 ~ 21481116 (+)
LOC110537171 LOC106568197 coding upstream 295712 21289084 ~ 21298403 (+)
LOC110537168 LOC106568260 coding upstream 629648 20961503 ~ 20964467 (+)
LOC110537167 LOC106568193 coding upstream 660249 20932536 ~ 20933866 (+)
LOC110537179 LOC106568202 coding downstream 4338 21598765 ~ 21626234 (+)
foxred1 foxred1 coding downstream 33870 21628297 ~ 21643733 (+)
LOC110537183 LOC105014907 coding downstream 60965 21655392 ~ 21666107 (+)
LOC110537185 LOC106568207 coding downstream 90931 21685358 ~ 21692839 (+)
LOC110537186 LOC106568203 coding downstream 104335 21698762 ~ 21722433 (+)
G1048259 NA non-coding upstream 88756 21505083 ~ 21505359 (+)
G1048257 NA non-coding upstream 91459 21502252 ~ 21502656 (+)
G1048256 NA non-coding upstream 100350 21493536 ~ 21493765 (+)
G1048253 NA non-coding upstream 102095 21491807 ~ 21492020 (+)
G1048250 NA non-coding upstream 105273 21488613 ~ 21488842 (+)
G1048273 NA non-coding downstream 19819 21614246 ~ 21614728 (+)
G1048275 NA non-coding downstream 32201 21626628 ~ 21626969 (+)
G1048350 NA non-coding downstream 80115 21674542 ~ 21674800 (+)
G1048363 NA non-coding downstream 107691 21702118 ~ 21702698 (+)
G1048382 NA non-coding downstream 122339 21716766 ~ 21716988 (+)
LOC110537158 LOC106568186 other upstream 902373 20667957 ~ 20694090 (+)
G1046929 NA other upstream 1082596 20509269 ~ 20511519 (+)
G1046823 NA other upstream 1300264 20282886 ~ 20293851 (+)
G1046724 NA other upstream 1446701 20144179 ~ 20147414 (+)
G1045418 NA other upstream 2628173 18965568 ~ 18965942 (+)
G1048417 LOC106568221 other downstream 238667 21833094 ~ 21834812 (+)
G1049502 NA other downstream 931514 22525941 ~ 22526232 (+)
G1049629 LOC106456187 other downstream 1134503 22728930 ~ 22737666 (+)
G1051534 NA other downstream 2583003 24177430 ~ 24177934 (+)
LOC110537258 msi2h other downstream 3758157 25352530 ~ 25719607 (+)

Expression


Co-expression Network