Gene
RNA
| Item | Value |
|---|---|
| gene id | G1048818 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 21598793 ~ 21599461 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1195209 | True | 669 | lncRNA | 0.42 | 1 | 21598793 | 21599461 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110536817 | LOC106568205 | coding | downstream | 16502 | 21559869 ~ 21582291 (-) |
| LOC110537178 | susd2 | coding | downstream | 54299 | 21526367 ~ 21544494 (-) |
| LOC110539130 | LOC106568216 | coding | downstream | 73902 | 21523514 ~ 21524891 (-) |
| LOC110537177 | LOC106568210 | coding | downstream | 96798 | 21495262 ~ 21501995 (-) |
| LOC110537176 | LOC106568262 | coding | downstream | 112165 | 21484831 ~ 21486628 (-) |
| cry5 | LOC106568206 | coding | upstream | 46353 | 21645814 ~ 21655245 (-) |
| LOC118937644 | LOC106564323 | coding | upstream | 67962 | 21667423 ~ 21669467 (-) |
| LOC118937645 | NA | coding | upstream | 130209 | 21729670 ~ 21735445 (-) |
| iscua | iscua | coding | upstream | 166566 | 21766027 ~ 21768958 (-) |
| LOC110537191 | LOC106568213 | coding | upstream | 178408 | 21777869 ~ 21780448 (-) |
| G1048820 | NA | non-coding | downstream | 6217 | 21591051 ~ 21592576 (-) |
| G1048776 | NA | non-coding | downstream | 104843 | 21493715 ~ 21493950 (-) |
| G1048740 | NA | non-coding | downstream | 144816 | 21417324 ~ 21453977 (-) |
| LOC110537172 | NA | non-coding | downstream | 285932 | 21311912 ~ 21312861 (-) |
| G1048018 | NA | non-coding | downstream | 386235 | 21130153 ~ 21212558 (-) |
| G1048834 | LOC106568202 | non-coding | upstream | 17738 | 21617199 ~ 21617498 (-) |
| G1048636 | kctd10 | non-coding | upstream | 64644 | 21664105 ~ 21666069 (-) |
| G1048859 | NA | non-coding | upstream | 81075 | 21680536 ~ 21680762 (-) |
| G1048900 | NA | non-coding | upstream | 113157 | 21712618 ~ 21712839 (-) |
| LOC110537166 | srsf9 | other | downstream | 661892 | 20933954 ~ 20938307 (-) |
| LOC110537162 | LOC106568189 | other | downstream | 732712 | 20862558 ~ 20888980 (-) |
| G1047473 | NA | other | downstream | 896753 | 20701540 ~ 20702040 (-) |
| LOC110537156 | LOC106568185 | other | downstream | 999366 | 20488123 ~ 20599476 (-) |
| G1047325 | NA | other | downstream | 1102365 | 20495565 ~ 20496428 (-) |
| G1048931 | NA | other | upstream | 185730 | 21785191 ~ 21785557 (-) |
| G1048983 | NA | other | upstream | 290077 | 21889538 ~ 21889869 (-) |
| G1049013 | LOC106568226 | other | upstream | 331722 | 21931183 ~ 21931785 (-) |
| G1048996 | NA | other | upstream | 337870 | 21937331 ~ 21938200 (-) |
| G1048995 | NA | other | upstream | 338985 | 21938446 ~ 21942996 (-) |
