Gene
RNA
| Item | Value |
|---|---|
| gene id | G1048906 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 21718835 ~ 21719082 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1195316 | True | 248 | lncRNA | 0.39 | 1 | 21718835 | 21719082 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118937644 | LOC106564323 | coding | downstream | 49368 | 21667423 ~ 21669467 (-) |
| cry5 | LOC106568206 | coding | downstream | 63590 | 21645814 ~ 21655245 (-) |
| LOC110536817 | LOC106568205 | coding | downstream | 136544 | 21559869 ~ 21582291 (-) |
| LOC110537178 | susd2 | coding | downstream | 174341 | 21526367 ~ 21544494 (-) |
| LOC110539130 | LOC106568216 | coding | downstream | 193944 | 21523514 ~ 21524891 (-) |
| LOC118937645 | NA | coding | upstream | 10588 | 21729670 ~ 21735445 (-) |
| iscua | iscua | coding | upstream | 46945 | 21766027 ~ 21768958 (-) |
| LOC110537191 | LOC106568213 | coding | upstream | 58787 | 21777869 ~ 21780448 (-) |
| LOC110537196 | LOC106568212 | coding | upstream | 85611 | 21804693 ~ 21805631 (-) |
| LOC110537198 | LOC106568221 | coding | upstream | 110076 | 21829158 ~ 21852005 (-) |
| G1048904 | NA | non-coding | downstream | 2793 | 21715837 ~ 21716042 (-) |
| G1048903 | ssh1 | non-coding | downstream | 3050 | 21715390 ~ 21715785 (-) |
| G1048900 | NA | non-coding | downstream | 5996 | 21712618 ~ 21712839 (-) |
| G1048859 | NA | non-coding | downstream | 38073 | 21680536 ~ 21680762 (-) |
| G1048636 | kctd10 | non-coding | downstream | 52766 | 21664105 ~ 21666069 (-) |
| G1048908 | LOC106568203 | non-coding | upstream | 1046 | 21720128 ~ 21720764 (-) |
| G1048910 | NA | non-coding | upstream | 8108 | 21727190 ~ 21727397 (-) |
| G1048932 | NA | non-coding | upstream | 67317 | 21786399 ~ 21786618 (-) |
| G1048965 | dgcr2 | non-coding | upstream | 100635 | 21819717 ~ 21821054 (-) |
| G1048883 | NA | non-coding | upstream | 108440 | 21827522 ~ 21828763 (-) |
| LOC110537166 | srsf9 | other | downstream | 781934 | 20933954 ~ 20938307 (-) |
| LOC110537162 | LOC106568189 | other | downstream | 852754 | 20862558 ~ 20888980 (-) |
| G1047473 | NA | other | downstream | 1016795 | 20701540 ~ 20702040 (-) |
| LOC110537156 | LOC106568185 | other | downstream | 1119408 | 20488123 ~ 20599476 (-) |
| G1047325 | NA | other | downstream | 1222407 | 20495565 ~ 20496428 (-) |
| G1048931 | NA | other | upstream | 66109 | 21785191 ~ 21785557 (-) |
| G1048983 | NA | other | upstream | 170456 | 21889538 ~ 21889869 (-) |
| G1049013 | LOC106568226 | other | upstream | 212101 | 21931183 ~ 21931785 (-) |
| G1048996 | NA | other | upstream | 218249 | 21937331 ~ 21938200 (-) |
| G1048995 | NA | other | upstream | 219364 | 21938446 ~ 21942996 (-) |
