G1048388


Basic Information

Item Value
gene id G1048388
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 21733555 ~ 21733773 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1194729
gagtaccacagtatgagtcataaaacccataaaacctagaggtcaaacagggaaatggttccaattgtttttccaccattaatttttcccataggggattttagaaacacttaaaataggtctgtgttttgtgtaggcttaccttgGTGTGACATCTGATAACTGAGTATTGTTTTTCTTGAAAATAATGGCACATTATTGTACTCTTTTCTCTAGGAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1194729 True 219 lncRNA 0.36 1 21733555 21733773

Neighbor

gene id symbol gene type direction distance location
LOC110537186 LOC106568203 coding upstream 11122 21698762 ~ 21722433 (+)
LOC110537185 LOC106568207 coding upstream 40716 21685358 ~ 21692839 (+)
LOC110537183 LOC105014907 coding upstream 67448 21655392 ~ 21666107 (+)
foxred1 foxred1 coding upstream 89822 21628297 ~ 21643733 (+)
LOC110537179 LOC106568202 coding upstream 107321 21598765 ~ 21626234 (+)
LOC110537189 LOC106568211 coding downstream 21521 21755294 ~ 21758765 (+)
LOC110537190 iscua coding downstream 27108 21760881 ~ 21768970 (+)
LOC110537192 LOC106568218 coding downstream 40661 21774434 ~ 21777732 (+)
LOC110537195 LOC106568209 coding downstream 62572 21796345 ~ 21805989 (+)
LOC110537193 idd coding downstream 72426 21806199 ~ 21826261 (+)
G1048268 NA non-coding upstream 7107 21723297 ~ 21726448 (+)
G1048385 NA non-coding upstream 13815 21719416 ~ 21719740 (+)
G1048384 NA non-coding upstream 14239 21719092 ~ 21719316 (+)
G1048382 NA non-coding upstream 16567 21716766 ~ 21716988 (+)
G1048363 NA non-coding upstream 30857 21702118 ~ 21702698 (+)
G1048399 NA non-coding downstream 36313 21770086 ~ 21770287 (+)
G1048407 NA non-coding downstream 52069 21785842 ~ 21786052 (+)
G1048377 NA non-coding downstream 93940 21827713 ~ 21828270 (+)
G1048419 LOC106568221 non-coding downstream 101953 21835726 ~ 21835994 (+)
LOC110537158 LOC106568186 other upstream 1041813 20667957 ~ 20694090 (+)
G1046929 NA other upstream 1222036 20509269 ~ 20511519 (+)
G1046823 NA other upstream 1439704 20282886 ~ 20293851 (+)
G1046724 NA other upstream 1586141 20144179 ~ 20147414 (+)
G1045418 NA other upstream 2767613 18965568 ~ 18965942 (+)
G1048417 LOC106568221 other downstream 99321 21833094 ~ 21834812 (+)
G1049502 NA other downstream 792168 22525941 ~ 22526232 (+)
G1049629 LOC106456187 other downstream 995157 22728930 ~ 22737666 (+)
G1051534 NA other downstream 2443657 24177430 ~ 24177934 (+)
LOC110537258 msi2h other downstream 3618811 25352530 ~ 25719607 (+)

Expression


Co-expression Network