Gene
RNA
| Item | Value |
|---|---|
| gene id | G1048429 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 21850788 ~ 21851359 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1194782 | False | 466 | lncRNA | 0.36 | 1 | 21850788 | 21851253 |
| TU1194783 | True | 572 | lncRNA | 0.34 | 1 | 21850788 | 21851359 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537193 | idd | coding | upstream | 24527 | 21806199 ~ 21826261 (+) |
| LOC110537195 | LOC106568209 | coding | upstream | 44799 | 21796345 ~ 21805989 (+) |
| LOC110537192 | LOC106568218 | coding | upstream | 73056 | 21774434 ~ 21777732 (+) |
| LOC110537190 | iscua | coding | upstream | 84548 | 21760881 ~ 21768970 (+) |
| LOC110537189 | LOC106568211 | coding | upstream | 92023 | 21755294 ~ 21758765 (+) |
| LOC110537199 | LOC106568222 | coding | downstream | 759 | 21851548 ~ 21862294 (+) |
| LOC110537201 | LOC106568226 | coding | downstream | 43964 | 21895323 ~ 21936857 (+) |
| LOC110536818 | LOC106568230 | coding | downstream | 177899 | 22029258 ~ 22038032 (+) |
| LOC110537207 | LOC106568232 | coding | downstream | 220602 | 22071961 ~ 22115724 (+) |
| LOC110537208 | LOC106568233 | coding | downstream | 271352 | 22122711 ~ 22133603 (+) |
| G1048419 | LOC106568221 | non-coding | upstream | 14794 | 21835726 ~ 21835994 (+) |
| G1048377 | NA | non-coding | upstream | 22518 | 21827713 ~ 21828270 (+) |
| G1048407 | NA | non-coding | upstream | 64736 | 21785842 ~ 21786052 (+) |
| G1048399 | NA | non-coding | upstream | 80501 | 21770086 ~ 21770287 (+) |
| G1048447 | NA | non-coding | downstream | 85585 | 21936944 ~ 21937162 (+) |
| G1048443 | NA | non-coding | downstream | 85956 | 21937315 ~ 21938200 (+) |
| G1048513 | NA | non-coding | downstream | 189745 | 22041104 ~ 22043798 (+) |
| G1048417 | LOC106568221 | other | upstream | 15976 | 21833094 ~ 21834812 (+) |
| LOC110537158 | LOC106568186 | other | upstream | 1159046 | 20667957 ~ 20694090 (+) |
| G1046929 | NA | other | upstream | 1339269 | 20509269 ~ 20511519 (+) |
| G1046823 | NA | other | upstream | 1556937 | 20282886 ~ 20293851 (+) |
| G1046724 | NA | other | upstream | 1703374 | 20144179 ~ 20147414 (+) |
| G1049502 | NA | other | downstream | 674582 | 22525941 ~ 22526232 (+) |
| G1049629 | LOC106456187 | other | downstream | 877571 | 22728930 ~ 22737666 (+) |
| G1051534 | NA | other | downstream | 2326071 | 24177430 ~ 24177934 (+) |
| LOC110537258 | msi2h | other | downstream | 3501225 | 25352530 ~ 25719607 (+) |
| LOC110537260 | LOC106567764 | other | downstream | 3978402 | 25796348 ~ 25836166 (+) |
