G1049013 (LOC106568226)


Basic Information

Item Value
gene id G1049013
gene name LOC106568226
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 21931183 ~ 21931785 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1195432
CAGGAGGCTCGTCCTCATCTTTGATGTCGAAcagcttcctcttcttcctcagagGGTTGTCCTCAGGCCTGGGTCGGGGATGAGGTAACAACATGGGAGAACGTTTCTTCAGAGGAGGATATTCCTCAGCTTTCCTCTTGGGGGTGTCATCACGCTCTGCCTTCCTCTTCACTGCAGTGGGTGATGTTGGCACACTGGGCAGGTCGGACTCTTCCTTAACGTCACGGTTCAATCGCGAGTCCTTCAGTAGCGACCCGGGCAGGTCGGACTCTTCCTTAACATCACGGTTTAATCGCGAGTCCTTCAGCAGCGACCCGGGAAGGTTGGACGCGTACTTGAACCCTGGTCCTCTTTTTTGCTTGACAGCTTTCCCGGTCTTCCCTGCATGGTTGCATTTTGGACACTCCCAGCAGTTTGGCAACTCTTCATTTACAACTCCACCAGAAT

Function

NR:

description
lysine-specific demethylase 2B-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1195432 True 447 TUCP 0.53 2 21931183 21931785

Neighbor

gene id symbol gene type direction distance location
LOC110537204 LOC106568227 coding downstream 30322 21897104 ~ 21900861 (-)
LOC110537200 LOC106568223 coding downstream 58555 21864698 ~ 21872628 (-)
LOC110537198 LOC106568221 coding downstream 79178 21829158 ~ 21852005 (-)
LOC110537196 LOC106568212 coding downstream 125552 21804693 ~ 21805631 (-)
LOC110537191 LOC106568213 coding downstream 150735 21777869 ~ 21780448 (-)
LOC110537202 LOC106568228 coding upstream 11369 21943154 ~ 21966665 (-)
LOC110537205 LOC106568229 coding upstream 45561 21977346 ~ 22021967 (-)
LOC110537206 LOC106568231 coding upstream 107357 22039142 ~ 22050714 (-)
LOC110537211 LOC100136462 coding upstream 283618 22215403 ~ 22226944 (-)
LOC110537212 LOC106568263 coding upstream 335546 22267331 ~ 22270536 (-)
G1048982 NA non-coding downstream 42745 21888200 ~ 21888438 (-)
G1048883 NA non-coding downstream 102420 21827522 ~ 21828763 (-)
G1048965 dgcr2 non-coding downstream 110129 21819717 ~ 21821054 (-)
G1048997 NA non-coding upstream 4463 21936248 ~ 21936803 (-)
G1048998 NA non-coding upstream 5167 21936952 ~ 21937202 (-)
G1049040 NA non-coding upstream 50724 21982509 ~ 22001469 (-)
G1049095 NA non-coding upstream 150042 22081827 ~ 22139980 (-)
G1049107 NA non-coding upstream 170100 22101885 ~ 22106835 (-)
G1048983 NA other downstream 41314 21889538 ~ 21889869 (-)
G1048931 NA other downstream 145626 21785191 ~ 21785557 (-)
LOC110537166 srsf9 other downstream 994282 20933954 ~ 20938307 (-)
LOC110537162 LOC106568189 other downstream 1065102 20862558 ~ 20888980 (-)
G1047473 NA other downstream 1229143 20701540 ~ 20702040 (-)
G1048996 NA other upstream 5546 21937331 ~ 21938200 (-)
G1048995 NA other upstream 6661 21938446 ~ 21942996 (-)
G1049089 NA other upstream 185277 22113948 ~ 22178642 (-)
G1049389 NA other upstream 405301 22337086 ~ 22340509 (-)
LOC110537218 LOC106568105 other upstream 612393 22540032 ~ 22546807 (-)

Expression


Co-expression Network