G1049501


Basic Information

Item Value
gene id G1049501
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 22525112 ~ 22525625 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1195984
ggtaggctttgttactttggtcccagctctctgcaggtcattcactaggtcactCTGTGTggatctgggatttttgctcaccgttcttgtgatcattttgaccccacggggtgagatcttgcgtggagccccagatcgagggagattatcagtggttttgtatgtcttccatttcctaataattgctcccacagttgatttcttcaaaccaagctgcttacctattgcagattcagtcttcccagcctggtgcaggtctacaattttgtttctggtgtcctttgacagctctttggtcttggccatagtggagtttggagtgtgactgtttgaggttgtggacaggtgtcttttatactgataacaagttcaaacaggtgccattaatacaggtaacgagtgggggacagaggagcctcttaaagaagaagttacaggtctgtgagagccagaaatcttgcttgtttgtaggtgaccaaatacttattttccaccataatttgcaaataaattc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1195984 True 514 lncRNA 0.44 1 22525112 22525625

Neighbor

gene id symbol gene type direction distance location
LOC110536819 LOC106568266 coding downstream 27947 22496737 ~ 22497165 (-)
LOC110537217 LOC106568238 coding downstream 30998 22489205 ~ 22494114 (-)
LOC118937646 NA coding downstream 48109 22467396 ~ 22477003 (-)
LOC110537215 LOC105014916 coding downstream 126127 22361779 ~ 22398985 (-)
LOC110537213 LOC106568236 coding downstream 231388 22272041 ~ 22293724 (-)
LOC110537218 LOC106568105 coding upstream 14407 22540032 ~ 22546807 (-)
LOC110536820 LOC106603249 coding upstream 82233 22607858 ~ 22654480 (-)
LOC118937648 NA coding upstream 98919 22624544 ~ 22625907 (-)
LOC118937649 LOC106603247 coding upstream 113364 22638989 ~ 22641219 (-)
LOC118937813 LOC106604822 coding upstream 133990 22659615 ~ 22662980 (-)
G1049492 NA non-coding downstream 4130 22520768 ~ 22520982 (-)
G1049473 NA non-coding downstream 20476 22504359 ~ 22504636 (-)
G1049429 NA non-coding downstream 81201 22443490 ~ 22443911 (-)
G1049428 NA non-coding downstream 82665 22442220 ~ 22442447 (-)
G1049425 NA non-coding downstream 85373 22439253 ~ 22439739 (-)
G1049503 NA non-coding upstream 292 22525917 ~ 22526146 (-)
G1049506 NA non-coding upstream 5195 22530820 ~ 22531096 (-)
G1049510 NA non-coding upstream 7394 22533019 ~ 22533254 (-)
G1049637 NA non-coding upstream 13967 22539592 ~ 22539868 (-)
G1049656 NA non-coding upstream 25301 22550926 ~ 22551202 (-)
G1049389 NA other downstream 184603 22337086 ~ 22340509 (-)
G1049089 NA other downstream 400208 22113948 ~ 22178642 (-)
G1048995 NA other downstream 582116 21938446 ~ 21942996 (-)
G1048996 NA other downstream 586912 21937331 ~ 21938200 (-)
G1049013 LOC106568226 other downstream 593327 21931183 ~ 21931785 (-)
G1049722 NA other upstream 163536 22689161 ~ 22689597 (-)
G1050429 NA other upstream 718012 23243637 ~ 23244270 (-)
G1052040 acaca other upstream 2029072 24554697 ~ 24555000 (-)

Expression


Co-expression Network