G1049502


Basic Information

Item Value
gene id G1049502
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 22525941 ~ 22526232 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1195985
gtgtaaaggaaagaatgaatggagccatgtatcgtgagattttgagtgaaagcctccttccatcagcaagggcattgaagatgaaacgtggctgggtctttcagcatgacaatgatcccaaacacaccgcccgggcaacgaaggagtggcttcgtaagaagcatttcaaggtcctggagtggcctagccagcctccagatctcaaccccatagaaaatctttggagggagttgaaagtctgtgttgcccagcaacagccccaaaacatcactgctctagatgagatctgcat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1195985 True 292 TUCP 0.49 1 22525941 22526232

Neighbor

gene id symbol gene type direction distance location
LOC110537216 bmp1 coding upstream 45959 22426629 ~ 22479982 (+)
LOC110539131 LOC106568265 coding upstream 108253 22405932 ~ 22417688 (+)
LOC110537214 NA coding upstream 128326 22294987 ~ 22397615 (+)
LOC110537210 LOC106568251 coding upstream 322563 22165430 ~ 22203378 (+)
LOC110537209 LOC106568235 coding upstream 368071 22151595 ~ 22157870 (+)
cbln17 LOC106568124 coding downstream 34254 22560486 ~ 22566933 (+)
LOC118937650 NA coding downstream 252336 22778568 ~ 22783781 (+)
LOC110536821 LOC106568123 coding downstream 288016 22814248 ~ 22821144 (+)
LOC118937878 avr3 coding downstream 363843 22890075 ~ 22891363 (+)
LOC110537228 avr3 coding downstream 375968 22902200 ~ 22903466 (+)
G1049500 NA non-coding upstream 437 22525174 ~ 22525504 (+)
G1049490 NA non-coding upstream 5560 22520171 ~ 22520381 (+)
G1049482 NA non-coding upstream 10338 22515404 ~ 22515603 (+)
G1049329 LOC106568238 non-coding upstream 35656 22489235 ~ 22490285 (+)
G1049249 LOC106568236 non-coding upstream 235867 22273018 ~ 22290074 (+)
G1049526 NA non-coding downstream 22213 22548445 ~ 22549185 (+)
G1049527 NA non-coding downstream 22995 22549227 ~ 22549445 (+)
G1049529 NA non-coding downstream 25501 22551733 ~ 22551996 (+)
G1049554 NA non-coding downstream 81667 22607899 ~ 22610184 (+)
G1049584 NA non-coding downstream 142946 22669178 ~ 22670643 (+)
G1048417 LOC106568221 other upstream 691129 21833094 ~ 21834812 (+)
LOC110537158 LOC106568186 other upstream 1834199 20667957 ~ 20694090 (+)
G1046929 NA other upstream 2014422 20509269 ~ 20511519 (+)
G1046823 NA other upstream 2232090 20282886 ~ 20293851 (+)
G1046724 NA other upstream 2378527 20144179 ~ 20147414 (+)
G1049629 LOC106456187 other downstream 202698 22728930 ~ 22737666 (+)
G1051534 NA other downstream 1651198 24177430 ~ 24177934 (+)
LOC110537258 msi2h other downstream 2826352 25352530 ~ 25719607 (+)
LOC110537260 LOC106567764 other downstream 3303529 25796348 ~ 25836166 (+)
G1052922 LOC106567769 other downstream 3371300 25897532 ~ 25899724 (+)

Expression


Co-expression Network