G1049637



Basic Information


Item Value
gene id G1049637
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 22539592 ~ 22539868 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1196139
CTGTTAGACAGTTCTCAGCAGCCAGCTCGTCCTGGAAGTGGAGAAACTTTCATTCTCTTTTTCCCAGAGGAGATGAAGCTCATGCAGAAGGTCTCCAAATCCCCAAACAATCTAAAGCCTAACAGGGTTTCTTAAAATTCCACGGAGTTAAACAAAGGCAGGTTGGAAcctggcggcagggtagcctagtggttagagagttggactagcaaccggaaggttgcaagttcaaaaccccaagctgacaagacacaaatctgtcgttctgcccctgaac

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1196139 True 277 lncRNA 0.48 1 22539592 22539868

Neighbor


gene id symbol gene type direction distance location
LOC110536819 LOC106568266 coding downstream 42427 22496737 ~ 22497165 (-)
LOC110537217 LOC106568238 coding downstream 45478 22489205 ~ 22494114 (-)
LOC118937646 NA coding downstream 62589 22467396 ~ 22477003 (-)
LOC110537215 LOC105014916 coding downstream 140607 22361779 ~ 22398985 (-)
LOC110537213 LOC106568236 coding downstream 245868 22272041 ~ 22293724 (-)
LOC110537218 LOC106568105 coding upstream 164 22540032 ~ 22546807 (-)
LOC110536820 LOC106603249 coding upstream 67990 22607858 ~ 22654480 (-)
LOC118937648 NA coding upstream 84676 22624544 ~ 22625907 (-)
LOC118937649 LOC106603247 coding upstream 99121 22638989 ~ 22641219 (-)
LOC118937813 LOC106604822 coding upstream 119747 22659615 ~ 22662980 (-)
G1049510 NA non-coding downstream 6338 22533019 ~ 22533254 (-)
G1049506 NA non-coding downstream 8496 22530820 ~ 22531096 (-)
G1049503 NA non-coding downstream 13446 22525917 ~ 22526146 (-)
G1049501 NA non-coding downstream 13967 22525112 ~ 22525625 (-)
G1049492 NA non-coding downstream 18610 22520768 ~ 22520982 (-)
G1049656 NA non-coding upstream 11058 22550926 ~ 22551202 (-)
G1049658 NA non-coding upstream 13499 22553367 ~ 22553570 (-)
G1049666 LOC106568124 non-coding upstream 21284 22561152 ~ 22566910 (-)
G1049711 NA non-coding upstream 132896 22672764 ~ 22673062 (-)
G1049713 NA non-coding upstream 135574 22675442 ~ 22676180 (-)
G1049389 NA other downstream 199083 22337086 ~ 22340509 (-)
G1049089 NA other downstream 414688 22113948 ~ 22178642 (-)
G1048995 NA other downstream 596596 21938446 ~ 21942996 (-)
G1048996 NA other downstream 601392 21937331 ~ 21938200 (-)
G1049013 LOC106568226 other downstream 607807 21931183 ~ 21931785 (-)
G1049722 NA other upstream 149293 22689161 ~ 22689597 (-)
G1050429 NA other upstream 703769 23243637 ~ 23244270 (-)
G1052040 acaca other upstream 2014829 24554697 ~ 24555000 (-)

Expression



Co-expression Network